RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 CCDC110Q8TBZ0 833 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 CCDC74AQ96AQ1 378 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 PPP1R2P1Q96PQ5 205 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 GORASP1Q9BQQ3 440 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 FICDQ9BVA6 458 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 GRPEL1Q9HAV7 217 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 LZTFL1Q9NQ48 299 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 TAAR2Q9P1P5 351 aa23.74■■□□□ 1.39
PFDN2-201ENST00000368010 OAS3Q9Y6K5 1087 aaKnown RBP23.74■■□□□ 1.39
PFDN2-201ENST00000368010 FRYQ5TBA9 3013 aa23.73■■□□□ 1.39
PFDN2-201ENST00000368010 AK4P27144 223 aaPredicted RBP23.73■■□□□ 1.39
PFDN2-201ENST00000368010 HMGCLP35914 325 aa23.73■■□□□ 1.39
PFDN2-201ENST00000368010 LRP8Q14114 963 aa23.73■■□□□ 1.39
PFDN2-201ENST00000368010 PYCR3Q53H96 274 aa23.73■■□□□ 1.39
PFDN2-201ENST00000368010 SLC30A9Q6PML9 568 aa23.73■■□□□ 1.39
PFDN2-201ENST00000368010 PROSER1Q86XN7 944 aa23.73■■□□□ 1.39
PFDN2-201ENST00000368010 BLOC1S5Q8TDH9 187 aa23.73■■□□□ 1.39
PFDN2-201ENST00000368010 NRSN2Q9GZP1 204 aa23.73■■□□□ 1.39
PFDN2-201ENST00000368010 SYNDIG1Q9H7V2 258 aa23.73■■□□□ 1.39
PFDN2-201ENST00000368010 SPATS2LQ9NUQ6 558 aaKnown RBP23.73■■□□□ 1.39
PFDN2-201ENST00000368010 DKK4Q9UBT3 224 aa23.73■■□□□ 1.39
PFDN2-201ENST00000368010 C5orf60A6NFR6 353 aa23.72■■□□□ 1.39
PFDN2-201ENST00000368010 CSO75390 466 aaKnown RBP23.72■■□□□ 1.39
PFDN2-201ENST00000368010 ACTR1BP42025 376 aa23.72■■□□□ 1.39
PFDN2-201ENST00000368010 ACTR1AP61163 376 aa23.72■■□□□ 1.39
PFDN2-201ENST00000368010 CYP4F3Q08477 520 aa23.72■■□□□ 1.39
PFDN2-201ENST00000368010 RPS6KA1Q15418 735 aa23.72■■□□□ 1.39
PFDN2-201ENST00000368010 GLT6D1Q7Z4J2 308 aa23.72■■□□□ 1.39
PFDN2-201ENST00000368010 TTC30BQ8N4P2 665 aa23.72■■□□□ 1.39
PFDN2-201ENST00000368010 SLC35B2Q8TB61 432 aa23.72■■□□□ 1.39
PFDN2-201ENST00000368010 ZDHHC1Q8WTX9 485 aa23.72■■□□□ 1.39
PFDN2-201ENST00000368010 PLEKHG4BQ96PX9 1271 aa23.72■■□□□ 1.39
PFDN2-201ENST00000368010 RMI1Q9H9A7 625 aa23.72■■□□□ 1.39
PFDN2-201ENST00000368010 BPIFA1Q9NP55 256 aa23.72■■□□□ 1.39
PFDN2-201ENST00000368010 R3HDM2Q9Y2K5 976 aaKnown RBP23.72■■□□□ 1.39
PFDN2-201ENST00000368010 TCRBV7S2A1N4TA0A589 114 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 DNAJC6O75061 913 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 TCEA3O75764 348 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 SLC25A14O95258 325 aaPredicted RBP23.71■■□□□ 1.39
PFDN2-201ENST00000368010 AGTP01019 485 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 GLB1P16278 677 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 HLTFQ14527 1009 aaKnown RBP eCLIP23.71■■□□□ 1.39
PFDN2-201ENST00000368010 CERCAMQ5T4B2 595 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 MEI1Q5TIA1 1274 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 ZDHHC20Q5W0Z9 365 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 RBM44Q6ZP01 1051 aaKnown RBP23.71■■□□□ 1.39
PFDN2-201ENST00000368010 ARHGEF18Q6ZSZ5 1173 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 PHYKPLQ8IUZ5 450 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 SFTPA2Q8IWL1 248 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 FAM71DQ8N9W8 422 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 GLYATL1Q969I3 302 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 LRRC45Q96CN5 670 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 CARD9Q9H257 536 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 ZNHIT2Q9UHR6 403 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 PCDHB1Q9Y5F3 818 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 ST14Q9Y5Y6 855 aa23.71■■□□□ 1.39
PFDN2-201ENST00000368010 GOLGA6L3A6NEY3 463 aa23.7■■□□□ 1.38
PFDN2-201ENST00000368010 SPIDRQ14159 915 aa23.7■■□□□ 1.38
PFDN2-201ENST00000368010 RTP5Q14D33 572 aa23.7■■□□□ 1.38
PFDN2-201ENST00000368010 ISXQ2M1V0 245 aa23.7■■□□□ 1.38
PFDN2-201ENST00000368010 RANBP10Q6VN20 620 aa23.7■■□□□ 1.38
PFDN2-201ENST00000368010 RABGEF1Q9UJ41 708 aa23.7■■□□□ 1.38
PFDN2-201ENST00000368010 PLEKHM1Q9Y4G2 1056 aa23.7■■□□□ 1.38
PFDN2-201ENST00000368010 AK5Q9Y6K8 562 aa23.7■■□□□ 1.38
PFDN2-201ENST00000368010 USP24Q9UPU5 2620 aa23.7■■□□□ 1.38
PFDN2-201ENST00000368010 KNTC1P50748 2209 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 NUDT21O43809 227 aaKnown RBP23.69■■□□□ 1.38
PFDN2-201ENST00000368010 PNLIPP16233 465 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 ADRA1AP35348 466 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 SPAM1P38567 509 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 C17orf82Q86X59 251 aaPredicted RBP23.69■■□□□ 1.38
PFDN2-201ENST00000368010 SLC13A5Q86YT5 568 aaPredicted RBP23.69■■□□□ 1.38
PFDN2-201ENST00000368010 APOL2Q9BQE5 337 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 FRMD8P1Q9BZ68 369 aaPredicted RBP23.69■■□□□ 1.38
PFDN2-201ENST00000368010 TRIM39Q9HCM9 518 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 ARFGAP3Q9NP61 516 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 IL17CQ9P0M4 197 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 LRIT1Q9P2V4 623 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 ATXN10Q9UBB4 475 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 APPL1Q9UKG1 709 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 PKP3Q9Y446 797 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 PRKAB1Q9Y478 270 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 PCYT1BQ9Y5K3 369 aaPredicted RBP23.69■■□□□ 1.38
PFDN2-201ENST00000368010 RNF215Q9Y6U7 377 aa23.69■■□□□ 1.38
PFDN2-201ENST00000368010 SRRM3A6NNA2 597 aaPredicted RBP23.68■■□□□ 1.38
PFDN2-201ENST00000368010 GPR89AB7ZAQ6 455 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 TAF4O00268 1085 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 NUAK1O60285 661 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 PPFIA2O75334 1257 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 RPLP0P05388 317 aaKnown RBP23.68■■□□□ 1.38
PFDN2-201ENST00000368010 GPR89BP0CG08 455 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 MAZP56270 477 aaKnown RBP23.68■■□□□ 1.38
PFDN2-201ENST00000368010 BIRC2Q13490 618 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 PARP6Q2NL67 630 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 CHST15Q7LFX5 561 aaPredicted RBP23.68■■□□□ 1.38
PFDN2-201ENST00000368010 CCNJLQ8IV13 435 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 TRIM58Q8NG06 486 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 ATG4AQ8WYN0 398 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 GRAMD1AQ96CP6 724 aa23.68■■□□□ 1.38
PFDN2-201ENST00000368010 VPS35Q96QK1 796 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms