RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 AP5B1Q2VPB7 878 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 TMEM220Q6QAJ8 160 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 C14orf80Q86SX3 495 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 TCAIMQ8N3R3 496 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 C12orf76Q8N812 135 aaPredicted RBP13.8□□□□□ -0.2
CTR9-201ENST00000361367 ATG10Q9H0Y0 220 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 DNAJC11Q9NVH1 559 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 TMEM248Q9NWD8 314 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 RPS6KB2Q9UBS0 482 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 CNTN6Q9UQ52 1028 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 TCRBV7S3A2A0A539 114 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 SNRPB2P08579 225 aaKnown RBP13.8□□□□□ -0.2
CTR9-201ENST00000361367 ZBTB17Q13105 803 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 NAE1Q13564 534 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 CYP2R1Q6VVX0 501 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 CPNE9Q8IYJ1 553 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 KLK6Q92876 244 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 OLFM3Q96PB7 478 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 SLC2A13Q96QE2 648 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 PCDH12Q9NPG4 1184 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 ZDHHC4Q9NPG8 344 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 SCN3BQ9NY72 215 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 MFHAS1Q9Y4C4 1052 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 NRAPQ86VF7 1730 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 FOXO6A8MYZ6 492 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 CCNHP51946 323 aaPredicted RBP13.8□□□□□ -0.2
CTR9-201ENST00000361367 PRKAG1P54619 331 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 PKNOX1P55347 436 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 OCA2Q04671 838 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 MPP5Q8N3R9 675 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 ANKLE1Q8NAG6 615 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 C12orf65Q9H3J6 166 aaKnown RBP13.8□□□□□ -0.2
CTR9-201ENST00000361367 TNRC6CQ9HCJ0 1690 aaKnown RBP13.8□□□□□ -0.2
CTR9-201ENST00000361367 TM7SF2O76062 418 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 ALPIP09923 528 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 DRD4P21917 467 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 POU1F1P28069 291 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 SLC1A2P43004 574 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 SF1Q15637 639 aaKnown RBP13.8□□□□□ -0.2
CTR9-201ENST00000361367 ALFQ53S48 1182 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 PDE12Q6L8Q7 609 aaKnown RBP13.8□□□□□ -0.2
CTR9-201ENST00000361367 TDRPQ86YL5 185 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 GLIS1Q8NBF1 620 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 IRF7Q92985 503 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 ARMC7Q9H6L4 198 aa13.8□□□□□ -0.2
CTR9-201ENST00000361367 ZNF840PA6NDX5 716 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 IQCF5A8MTL0 148 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 ZBTB42B2RXF5 422 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 TRAFD1O14545 582 aaPredicted RBP13.79□□□□□ -0.2
CTR9-201ENST00000361367 WNT9AO14904 365 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 GSTM1P09488 218 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 HNRNPA1P09651 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
CTR9-201ENST00000361367 HSPA13P48723 471 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 RGS1Q08116 209 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 CSTF3Q12996 717 aaKnown RBP13.79□□□□□ -0.2
CTR9-201ENST00000361367 TCEAL1Q15170 157 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 BRAT1Q6PJG6 821 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 C2orf73Q8N5S3 287 aaPredicted RBP13.79□□□□□ -0.2
CTR9-201ENST00000361367 SIPA1Q96FS4 1042 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 CDH19Q9H159 772 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 RAD21L1Q9H4I0 556 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 LRP5O75197 1615 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.79□□□□□ -0.2
CTR9-201ENST00000361367 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.79□□□□□ -0.2
CTR9-201ENST00000361367 KCNH1O95259 989 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 CYP11A1P05108 521 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 EDN1P05305 212 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 FASP25445 335 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 ZNF33AQ06730 810 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 SERINC3Q13530 473 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 ACAP2Q15057 778 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 ZBTB49Q6ZSB9 765 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 CHST15Q7LFX5 561 aaPredicted RBP13.79□□□□□ -0.2
CTR9-201ENST00000361367 TMPRSS11BQ86T26 416 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 ATG16L2Q8NAA4 619 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 PHC3Q8NDX5 983 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 C1orf74Q96LT6 269 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 ZDHHC18Q9NUE0 388 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 IL36AQ9UHA7 158 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 LGALS13Q9UHV8 139 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 OR51F1A6NGY5 319 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 MPSTP25325 297 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 IRX1P78414 480 aaPredicted RBP13.79□□□□□ -0.2
CTR9-201ENST00000361367 PWP1Q13610 501 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 PLEKHG4Q58EX7 1191 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 SIRPB2Q5JXA9 342 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 IRAK1BP1Q5VVH5 260 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 ZCCHC8Q6NZY4 707 aaKnown RBP13.79□□□□□ -0.2
CTR9-201ENST00000361367 SNX20Q7Z614 316 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 HMGB4Q8WW32 186 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 OTUB2Q96DC9 234 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 CDKN2AIPNLQ96HQ2 116 aa13.79□□□□□ -0.2
CTR9-201ENST00000361367 INTS10Q9NVR2 710 aaKnown RBP13.79□□□□□ -0.2
CTR9-201ENST00000361367 LEF1Q9UJU2 399 aaPredicted RBP13.79□□□□□ -0.2
CTR9-201ENST00000361367 M0QZQ0 153 aa13.78□□□□□ -0.2
CTR9-201ENST00000361367 UGT1A9O60656 530 aa13.78□□□□□ -0.2
CTR9-201ENST00000361367 PLIN3O60664 434 aa13.78□□□□□ -0.2
CTR9-201ENST00000361367 UGT1A6P19224 532 aa13.78□□□□□ -0.2
CTR9-201ENST00000361367 UGT1A1P22309 533 aa13.78□□□□□ -0.2
CTR9-201ENST00000361367 UGT1A4P22310 534 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms