RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 HACD1B0YJ81 288 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 ZNF487B1APH4 448 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 ACADSBP45954 432 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 SLC7A2P52569 658 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 PFKPQ01813 784 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 TNK2Q07912 1038 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 PMS2P3Q13401 168 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 RFTN1Q14699 578 aaPredicted RBP9.08□□□□□ -0.96
TOP1-201ENST00000361337 PSMD5Q16401 504 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 NFE2Q16621 373 aaPredicted RBP9.08□□□□□ -0.96
TOP1-201ENST00000361337 SMU1Q2TAY7 513 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 KCTD11Q693B1 232 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 CLEC6AQ6EIG7 209 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 OTOP3Q7RTS5 596 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 SYTL1Q8IYJ3 562 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 ALDH16A1Q8IZ83 802 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 CLEC4FQ8N1N0 589 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 TMEM199Q8N511 208 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 EFHBQ8N7U6 833 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 SPATA22Q8NHS9 363 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 TFAP2CQ92754 450 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 GPR22Q99680 433 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 ANKRD60Q9BZ19 345 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 REXO4Q9GZR2 422 aaKnown RBP9.08□□□□□ -0.96
TOP1-201ENST00000361337 EHD1Q9H4M9 534 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 CLK4Q9HAZ1 481 aaKnown RBP9.08□□□□□ -0.96
TOP1-201ENST00000361337 SP110Q9HB58 689 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 WDR6Q9NNW5 1121 aaKnown RBP9.08□□□□□ -0.96
TOP1-201ENST00000361337 CASS4Q9NQ75 786 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 SLC2A6Q9UGQ3 507 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 EGFL7Q9UHF1 273 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 CASP8AP2Q9UKL3 1982 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 CNOT11Q9UKZ1 510 aaKnown RBP9.08□□□□□ -0.96
TOP1-201ENST00000361337 KIAA1257Q9ULG3 409 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 PTGDR2Q9Y5Y4 395 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 NUP205Q92621 2012 aa9.08□□□□□ -0.96
TOP1-201ENST00000361337 MBLAC1A4D2B0 266 aaPredicted RBP9.07□□□□□ -0.96
TOP1-201ENST00000361337 ASNA1O43681 348 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 SNX2O60749 519 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 CXCL14O95715 111 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 CHRM3P20309 590 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 RCVRNP35243 200 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 SLC11A1P49279 550 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 FASTKQ14296 549 aaKnown RBP9.07□□□□□ -0.96
TOP1-201ENST00000361337 HERC3Q15034 1050 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 DCLRE1AQ6PJP8 1040 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 DNAJC14Q6Y2X3 702 aaPredicted RBP9.07□□□□□ -0.96
TOP1-201ENST00000361337 TMEM26Q6ZUK4 368 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 ZNF419Q96HQ0 510 aaPredicted RBP9.07□□□□□ -0.96
TOP1-201ENST00000361337 VPS50Q96JG6 964 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 ZNF558Q96NG5 402 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 DEPDC7Q96QD5 511 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 POMKQ9H5K3 350 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 PKD2L2Q9NZM6 624 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 SUCOQ9UBS9 1254 aaKnown RBP9.07□□□□□ -0.96
TOP1-201ENST00000361337 PCDHGA3Q9Y5H0 932 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 TCRBV3S1A0A5B6 114 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 HEATR9A2RTY3 570 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 KPNA4O00629 521 aaPredicted RBP9.07□□□□□ -0.96
TOP1-201ENST00000361337 DCLK1O15075 740 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 ERCC2P18074 760 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 COPZ1P61923 177 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 DEFB103AP81534 67 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 DPYSQ14117 519 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 TGFBIQ15582 683 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 POM121L1PQ3SYA9 428 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 RAP1GAP2Q684P5 730 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 DHRS4L2Q6PKH6 230 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 CYHR1Q6ZMK1 362 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 RETREG3Q86VR2 466 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 SNX29P2Q8IUI4 249 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 Q8N9G6 341 aaPredicted RBP9.07□□□□□ -0.96
TOP1-201ENST00000361337 OR6P1Q8NGX9 317 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 MAELQ96JY0 434 aaKnown RBP9.07□□□□□ -0.96
TOP1-201ENST00000361337 CHST12Q9NRB3 414 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 GMIPQ9P107 970 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 CD300AQ9UGN4 299 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 RANBP2P49792 3224 aaKnown RBP9.07□□□□□ -0.96
TOP1-201ENST00000361337 A0A1W2PQH9 124 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 GRXCR1A8MXD5 290 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 STK25O00506 426 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 TIMM44O43615 452 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 CLTBP09497 229 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 OXTRP30559 389 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 CBX2Q14781 532 aaPredicted RBP9.07□□□□□ -0.96
TOP1-201ENST00000361337 POU6F1Q14863 301 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 ZNF789Q5FWF6 425 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 AARS2Q5JTZ9 985 aaKnown RBP9.07□□□□□ -0.96
TOP1-201ENST00000361337 SETD3Q86TU7 594 aaPredicted RBP9.07□□□□□ -0.96
TOP1-201ENST00000361337 CROCCP3Q8IVE0 287 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 CLIP4Q8N3C7 705 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 SH3RF2Q8TEC5 729 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 HEXDCQ8WVB3 486 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 BIRC8Q96P09 236 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 TTPALQ9BTX7 342 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 FSD1LQ9BXM9 530 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 DUSP16Q9BY84 665 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 CRTAC1Q9NQ79 661 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 GKN1Q9NS71 199 aa9.07□□□□□ -0.96
TOP1-201ENST00000361337 SCHIP1Q9P0W5 487 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms