RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ARF4P18085 180 aaPredicted RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 POLR2EP19388 210 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 OR1E1P30953 314 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 GMPSP49915 693 aaPredicted RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 MTPNP58546 118 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 AP5B1Q2VPB7 878 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 SMAD5Q99717 465 aaKnown RBP15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 HERC2P3Q9BVR0 1158 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 MOCS1Q9NZB8 636 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 ERGIC3Q9Y282 383 aa15.91■□□□□ 0.14
CLSTN1-201ENST00000361311 CYP7B1O75881 506 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 GABBR2O75899 941 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 THP07101 528 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 DDX5P17844 614 aaKnown RBP15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 MZF1P28698 734 aaPredicted RBP15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 CRY1Q16526 586 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 SPATC1LQ9H0A9 340 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 SP140LQ9H930 580 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 ING3Q9NXR8 418 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 A8MT66 165 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 GPR25O00155 361 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 ENDOD1O94919 500 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 HOXC6P09630 235 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 MYL12AP19105 171 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 SLC1A2P43004 574 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 AIF1P55008 147 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 OR2B6P58173 313 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 OLIG2Q13516 323 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 GK3PQ14409 553 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 CYP2A13Q16696 494 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 FKBP1CQ5VVH2 108 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 OR10A6Q8NH74 314 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 ZNF512Q96ME7 567 aaPredicted RBP15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 FOPNLQ96NB1 174 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 MUS81Q96NY9 551 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 GPR22Q99680 433 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 LRRC3Q9BY71 257 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 RNF38Q9H0F5 515 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 TRPV5Q9NQA5 729 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 GMIPQ9P107 970 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 RIPK3Q9Y572 518 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 SLC12A8A0AV02 714 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 VILLO15195 856 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 ENO2P09104 434 aaPredicted RBP15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 EEFSECP57772 596 aaKnown RBP15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 NFATC3Q12968 1075 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 CNSTQ6PJW8 725 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 HDDC2Q7Z4H3 204 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 R3HCC1LQ7Z5L2 792 aaKnown RBP15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 SLC15A4Q8N697 577 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 LRRC52Q8N7C0 313 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 NSMCE3Q96MG7 304 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 VPS35Q96QK1 796 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 SEPT5Q99719 369 aaPredicted RBP15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 DUSP16Q9BY84 665 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 TRIM64CA6NLI5 447 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 SNAP29O95721 258 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 ZNF7P17097 686 aaPredicted RBP15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 HOXB6P17509 224 aaKnown RBP15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 ITIH1P19827 911 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 FMO3P31513 532 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 ZNF252P-AS1Q0IIN9 211 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 COX10Q12887 443 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 PPP1R8Q12972 351 aaKnown RBP15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 SYT16Q17RD7 645 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 SYT12Q8IV01 421 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 ANKLE1Q8NAG6 615 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 MAPK15Q8TD08 544 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 RGPD2P0DJD1 1756 aa15.9■□□□□ 0.14
CLSTN1-201ENST00000361311 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 ILVBLA1L0T0 632 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 CCRL2O00421 344 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 BTN3A3O00478 584 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 WNT10BO00744 389 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 PIGRP01833 764 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 C8BP07358 591 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 GSTM1P09488 218 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 BDNFP23560 247 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 MAGEA10P43363 369 aaPredicted RBP15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 TBX4P57082 545 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 ZNF177Q13360 481 aaPredicted RBP15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 NPTX1Q15818 432 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 PIK3C3Q8NEB9 887 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 CLEC4CQ8WTT0 213 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 ZUFSPQ96AP4 578 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 SH3KBP1Q96B97 665 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 SLC45A3Q96JT2 553 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 HBEGFQ99075 208 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 HEPHQ9BQS7 1158 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 FBRSL1Q9HCM7 1045 aaKnown RBP15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 CLN6Q9NWW5 311 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 UXTQ9UBK9 157 aaPredicted RBP15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 OGDHLQ9ULD0 1010 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 SAMD4AQ9UPU9 718 aaKnown RBP15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 CCL22O00626 93 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 AURKAO14965 403 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 OTCP00480 354 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 AHSGP02765 367 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 CDH1P12830 882 aa15.89■□□□□ 0.13
CLSTN1-201ENST00000361311 GRIK4Q16099 956 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms