RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 RPLP0P05388 317 aaKnown RBP13.9□□□□□ -0.18
SMC5-201ENST00000361138 ERMP1Q7Z2K6 904 aa13.9□□□□□ -0.18
SMC5-201ENST00000361138 SLC22A16Q86VW1 577 aa13.9□□□□□ -0.18
SMC5-201ENST00000361138 DMRTB1Q96MA1 342 aa13.9□□□□□ -0.18
SMC5-201ENST00000361138 KCNS3Q9BQ31 491 aa13.9□□□□□ -0.18
SMC5-201ENST00000361138 BPIFA1Q9NP55 256 aa13.9□□□□□ -0.18
SMC5-201ENST00000361138 CCDC162PA2VCL2 907 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 TP73O15350 636 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 MBL2P11226 248 aaPredicted RBP13.89□□□□□ -0.19
SMC5-201ENST00000361138 GRK4P32298 578 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 CLCN2P51788 898 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 RHDQ02161 417 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 LCP2Q13094 533 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 DAG1Q14118 895 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 RASSF5Q8WWW0 418 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 PRR11Q96HE9 360 aaPredicted RBP13.89□□□□□ -0.19
SMC5-201ENST00000361138 TMEM9Q9P0T7 183 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 SLC25A13Q9UJS0 675 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 TFPTP0C1Z6 253 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 FBXW4P57775 412 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 BICRALQ6AI39 1079 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 SDE2Q6IQ49 451 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 OR5K1Q8NHB7 308 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 PARK7Q99497 189 aaKnown RBP13.89□□□□□ -0.19
SMC5-201ENST00000361138 DTLQ9NZJ0 730 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 DERAQ9Y315 318 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 BOLA2-SMG1P6H3BVE0 249 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 DPYSL4O14531 572 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 HTRA2O43464 458 aaPredicted RBP13.89□□□□□ -0.19
SMC5-201ENST00000361138 LRATO95237 230 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 THPOP40225 353 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 GRM5P41594 1212 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 GRIA1P42261 906 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 STARD3Q14849 445 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 UBAP2Q5T6F2 1119 aaKnown RBP13.89□□□□□ -0.19
SMC5-201ENST00000361138 OGFRL1Q5TC84 451 aaPredicted RBP13.89□□□□□ -0.19
SMC5-201ENST00000361138 XKR5Q6UX68 686 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 LRRC52Q8N7C0 313 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 SEMA3CQ99985 751 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 CHCHD6Q9BRQ6 235 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 CARD8Q9Y2G2 431 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 MYOCOSA0A1B0GUC4 107 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 ZBTB14O43829 449 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 SH3BGRLO75368 114 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 POMCP01189 267 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 FGF3P11487 239 aaPredicted RBP13.89□□□□□ -0.19
SMC5-201ENST00000361138 ADRA1BP35368 520 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 HNF4AP41235 474 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 UGT2B15P54855 530 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 SIX1Q15475 284 aaPredicted RBP13.89□□□□□ -0.19
SMC5-201ENST00000361138 TGFBIQ15582 683 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 ZNF423Q2M1K9 1284 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 TMEM110Q86TL2 294 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 ARMC8Q8IUR7 673 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 TTC29Q8NA56 475 aaPredicted RBP13.89□□□□□ -0.19
SMC5-201ENST00000361138 CMASQ8NFW8 434 aaPredicted RBP13.89□□□□□ -0.19
SMC5-201ENST00000361138 FEM1CQ96JP0 617 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 KLHL28Q9NXS3 571 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 TRPM5Q9NZQ8 1165 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 PCDHB5Q9Y5E4 795 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 SNED1Q8TER0 1413 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 TMCO6Q96DC7 493 aa13.89□□□□□ -0.19
SMC5-201ENST00000361138 MAGEB10Q96LZ2 347 aaPredicted RBP13.89□□□□□ -0.19
SMC5-201ENST00000361138 A0A0J9YVX5 310 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 RPP40O75818 363 aaKnown RBP13.88□□□□□ -0.19
SMC5-201ENST00000361138 CENPAP49450 140 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 PTSQ03393 145 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 SCN1BQ07699 218 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 AP5B1Q2VPB7 878 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 INTS6LQ5JSJ4 861 aaKnown RBP13.88□□□□□ -0.19
SMC5-201ENST00000361138 FKBP1CQ5VVH2 108 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 NARS2Q96I59 477 aaKnown RBP13.88□□□□□ -0.19
SMC5-201ENST00000361138 BMP10O95393 424 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 C9P02748 559 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 FMO3P31513 532 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 CTSKP43235 329 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 STT3AP46977 705 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 OGDHQ02218 1023 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 NFE2Q16621 373 aaPredicted RBP13.88□□□□□ -0.19
SMC5-201ENST00000361138 COLEC12Q5KU26 742 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 LCN1P1Q5VSP4 162 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 DCLRE1AQ6PJP8 1040 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 PLET1Q6UQ28 207 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 DENND6AQ8IWF6 608 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 SLC34A3Q8N130 599 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 C1orf127Q8N9H9 656 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 NDRG1Q92597 394 aaKnown RBP13.88□□□□□ -0.19
SMC5-201ENST00000361138 ASB3Q9Y575 518 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 PCDHB7Q9Y5E2 793 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 NPM3O75607 178 aaKnown RBP13.88□□□□□ -0.19
SMC5-201ENST00000361138 FGF1P05230 155 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 L1CAMP32004 1257 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 C9orf57Q5W0N0 161 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 FCGR1BQ92637 280 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 FBXL20Q96IG2 436 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 COLEC11Q9BWP8 271 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 EHD1Q9H4M9 534 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 HES2Q9Y543 173 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 A0A1W2PPW3 197 aa13.88□□□□□ -0.19
SMC5-201ENST00000361138 CXCR6O00574 342 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms