RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TMEM44Q2T9K0 475 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 SEZ6Q53EL9 994 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 HSDL2Q6YN16 418 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 PHYKPLQ8IUZ5 450 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 ERI1Q8IV48 349 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 TNS4Q8IZW8 715 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 DAGLBQ8NCG7 672 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 HHATLQ9HCP6 504 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 ITGA2BP08514 1039 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 MSR1P21757 451 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 ATP5C1P36542 298 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 SCARF1Q14162 830 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 LACTB2Q53H82 288 aaPredicted RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 CLNKQ7Z7G1 428 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 IFNL1Q8IU54 200 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 HDDC3Q8N4P3 179 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 MRPL57Q9BQC6 102 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 IDI2Q9BXS1 227 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 EFCAB9A8MZ26 197 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 IGKV5-2P06315 115 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 GRK5P34947 590 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 PUS10Q3MIT2 529 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 ZNF697Q5TEC3 545 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 CLIP4Q8N3C7 705 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 LPCAT1Q8NF37 534 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 ASAH2Q9NR71 780 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 CHST7Q9NS84 486 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 SDK1Q7Z5N4 2213 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 TUBP50607 506 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 RGS8P57771 180 aaPredicted RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 BTG3Q14201 252 aaPredicted RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 GARNL3Q5VVW2 1013 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 SPPL2CQ8IUH8 684 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 NSUN4Q96CB9 384 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 HOPXQ9BPY8 73 aaPredicted RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 GULP1Q9UBP9 304 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 CELF2O95319 508 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 PEX2P28328 305 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 TMBIM6P55061 237 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 CAV3P56539 151 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 ADAM8P78325 824 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 FAPQ12884 760 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 SHQ1Q6PI26 577 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 ZNF567Q8N184 647 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 CELF6Q96J87 481 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 EBF3Q9H4W6 596 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 SLC37A4O43826 429 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 NUDT17P0C025 328 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 ACADVLP49748 655 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 TBX2Q13207 712 aaPredicted RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 GRB10Q13322 594 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 RHEBQ15382 184 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 FSCN1Q16658 493 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 TMEM17Q86X19 198 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 SLITRK4Q8IW52 837 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 SLC30A8Q8IWU4 369 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 PFDN5Q99471 154 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 HPSEQ9Y251 543 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 FGBP02675 491 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 HMGCRP04035 888 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 SLC35G4P0C7Q5 338 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 LINC00032P0C843 101 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 BUD31P41223 144 aaPredicted RBP13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 RAB12Q6IQ22 244 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 SLC16A10Q8TF71 515 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 A0A0J9YVX5 310 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 THEGLP0DJG4 465 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 PRKG2Q13237 762 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 RBM15BQ8NDT2 890 aaKnown RBP13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 OR52E6Q96RD3 313 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 MGME1Q9BQP7 344 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 COMMD4Q9H0A8 199 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 ETNK2Q9NVF9 386 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 PDP1Q9P0J1 537 aaPredicted RBP13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 BTRCQ9Y297 605 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 USP42Q9H9J4 1324 aaKnown RBP13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 CD2P06729 351 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 CD40LGP29965 261 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 SNAPC1Q16533 368 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 SUN3Q8TAQ9 357 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 PCDHGB2Q9Y5G2 931 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 AKAP3O75969 853 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 UGT2B4P06133 528 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 ZSCAN5DPP0CG00 497 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 ABL2P42684 1182 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 SMG7Q92540 1137 aaKnown RBP13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 PANX1Q96RD7 426 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 PITPNAQ00169 270 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 ADIGQ0VDE8 80 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 GPR65Q8IYL9 337 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 ABRAQ8N0Z2 381 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 LEMD2Q8NC56 503 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 FAM98AQ8NCA5 519 aaKnown RBP13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 ZNF548Q8NEK5 533 aaPredicted RBP13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 CEP295NLQ96MC4 621 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 PREBQ9HCU5 417 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 PCDHGC3Q9UN70 934 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 NCOA3Q9Y6Q9 1424 aa13.15□□□□□ -0.3
SRGAP3-201ENST00000360413 CNTNAP2Q9UHC6 1331 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms