RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 MTMR9Q96QG7 549 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 ERGIC3Q9Y282 383 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 TBC1D30Q9Y2I9 924 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 MAP4K5Q9Y4K4 846 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 MADDQ8WXG6 1647 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 PER2O15055 1255 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 PCDHGA12O60330 932 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 RAB27AP51159 221 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 NDST1P52848 882 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 MYL6P60660 151 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 HECTD3Q5T447 861 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 ERICH5Q6P6B1 374 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 CXCL17Q6UXB2 119 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 ZNF565Q8N9K5 539 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 GRHL3Q8TE85 626 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 CPT1BQ92523 772 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 PPCDCQ96CD2 204 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 KXD1Q9BQD3 176 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 RIOK2Q9BVS4 552 aaKnown RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 USP29Q9HBJ7 922 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 GLOD4Q9HC38 313 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 AGPAT3Q9NRZ7 376 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 SNTG1Q9NSN8 517 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 MRPS17Q9Y2R5 130 aaKnown RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 CEP170BQ9Y4F5 1589 aaPredicted RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 hCG_1807616A0A1W2PRN6 198 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 MAGEA11P43364 429 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 RFX5P48382 616 aaPredicted RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 PKNOX1P55347 436 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 CNTN2Q02246 1040 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 ZCCHC23Q6ZST2 131 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 ZDHHC13Q8IUH4 622 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 PCDH19Q8TAB3 1148 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 ZNF607Q96SK3 696 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 UCK2Q9BZX2 261 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 B3GAT2Q9NPZ5 323 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 CFAP97Q9P2B7 532 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 FOXN3O00409 490 aaPredicted RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 GYPCP04921 128 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 TNFRSF8P28908 595 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 NRG1Q02297 640 aaPredicted RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 CDK10Q15131 360 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 SYVN1Q86TM6 617 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 TMC8Q8IU68 726 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 EZH1Q92800 747 aaPredicted RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 C1orf50Q9BV19 199 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 OSBPL11Q9BXB4 747 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 COMMD4Q9H0A8 199 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 ZNF700Q9H0M5 742 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 POLMQ9NP87 494 aaPredicted RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 PFDN2Q9UHV9 154 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 SNX12Q9UMY4 172 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 GAKO14976 1311 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 DDX3YO15523 660 aaKnown RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 NPR3P17342 541 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 CREMQ03060 361 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 RASA2Q15283 850 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 AADACL4Q5VUY2 407 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 C1orf186Q6ZWK4 172 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 LINGO2Q7L985 606 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 SLC43A3Q8NBI5 491 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 C3orf20Q8ND61 904 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 ZNF548Q8NEK5 533 aaPredicted RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 GDPD5Q8WTR4 605 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 SMG7Q92540 1137 aaKnown RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 KIAA1143Q96AT1 154 aaPredicted RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.73□□□□□ -0.85
CHD3-202ENST00000358181 HCN2Q9UL51 889 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 TNFSF12O43508 249 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 CLPTM1O96005 669 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 LINC00032P0C843 101 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 SRYQ05066 204 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 PDK2Q15119 407 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 ATXN7L2Q5T6C5 722 aaPredicted RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 TRAPPC11Q7Z392 1133 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 SLC34A3Q8N130 599 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 RIBC1Q8N443 379 aaPredicted RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 DNAJB14Q8TBM8 379 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 DUS2Q9NX74 493 aaKnown RBP9.73□□□□□ -0.85
CHD3-202ENST00000358181 SNX7Q9UNH6 387 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 SSR3Q9UNL2 185 aa9.73□□□□□ -0.85
CHD3-202ENST00000358181 PIK3C2BO00750 1634 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 CYP11A1P05108 521 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 ZNF8P17098 575 aaPredicted RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 OR3A3P47888 321 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 OR3A2P47893 321 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 NPTX2P47972 431 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 FASLGP48023 281 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 BOLA3Q53S33 107 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 ARHGAP36Q6ZRI8 547 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 TBC1D15Q8TC07 691 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 SLC2A14Q8TDB8 520 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 CDCA5Q96FF9 252 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 POLR1EQ9GZS1 481 aaKnown RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 CCNB1IP1Q9NPC3 277 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 GNG13Q9P2W3 67 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 MAP2P11137 1827 aaKnown RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 F8VZ95 297 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 CBFA2T3O75081 653 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms