RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 IL7RP16871 459 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 RCVRNP35243 200 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 TPI1P60174 286 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 DNASE1L3Q13609 305 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 CELF3Q5SZQ8 465 aaKnown RBP12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 TMEM207Q6UWW9 146 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 C8orf59Q8N0T1 100 aaPredicted RBP12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 PPHLN1Q8NEY8 458 aaKnown RBP12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 SLC2A14Q8TDB8 520 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 PHF10Q8WUB8 498 aaKnown RBP12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 CHAC2Q8WUX2 184 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 KCTD13Q8WZ19 329 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 ERLEC1Q96DZ1 483 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 ASB2Q96Q27 587 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 FCRL5Q96RD9 977 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 FDXACB1Q9BRP7 624 aaPredicted RBP12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 KLHL25Q9H0H3 589 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 ING2Q9H160 280 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 NECTIN3Q9NQS3 549 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 FAM118AQ9NWS6 357 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 KLQ9UEF7 1012 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 GIMAP2Q9UG22 337 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 VPS51Q9UID3 782 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 FBXW11Q9UKB1 542 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 PDE10AQ9Y233 779 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 PTGDR2Q9Y5Y4 395 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 HBP1O60381 514 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 CLCN5P51795 746 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 INAQ16352 499 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 FSCN1Q16658 493 aaKnown RBP12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 ZIK1Q3SY52 487 aaPredicted RBP12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 SLCO6A1Q86UG4 719 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 SPATA22Q8NHS9 363 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 TWIST2Q8WVJ9 160 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 PGAP3Q96FM1 320 aaPredicted RBP12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 CLSTN3Q9BQT9 956 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 HOXD1Q9GZZ0 328 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 SP140LQ9H930 580 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 PLEKHA5Q9HAU0 1116 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 CPNE5Q9HCH3 593 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 PAK1IP1Q9NWT1 392 aaPredicted RBP12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 BAG5Q9UL15 447 aa12.06□□□□□ -0.48
SMARCAL1-201ENST00000357276 TYW5A2RUC4 315 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 PIP5K1BO14986 540 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 SLC22A1O15245 554 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 TSPAN1O60635 241 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 TULP3O75386 442 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 SLC12A2P55011 1212 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 HIST2H2ACQ16777 129 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 PAGE3Q5JUK9 113 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 TTC23Q5W5X9 447 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 CATSPER4Q7RTX7 472 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 TMBIM1Q969X1 311 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 FAM149B1Q96BN6 582 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 AMBRA1Q9C0C7 1298 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 TOR3AQ9H497 397 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 USE1Q9NZ43 259 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 GJD2Q9UKL4 321 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 C19orf81C9J6K1 198 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 C9JVG2 144 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 SOCS7O14512 581 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 SUPT7LO94864 414 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 INMTO95050 263 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 MT-ND1P03886 318 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 FOXA1P55317 472 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 EMX2Q04743 252 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 POLD3Q15054 466 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 PGS1Q32NB8 556 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 ADPRMQ3LIE5 342 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 NBPF12Q5TAG4 269 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 HFE2Q6ZVN8 426 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 DNAJB14Q8TBM8 379 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 DYNC2LI1Q8TCX1 351 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 ZNF566Q969W8 418 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 POLG2Q9UHN1 485 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 PCDHB3Q9Y5E6 796 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 SYNJ2BP-COX16A0A087WUM0 186 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 MT-CYBP00156 380 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 LBPP18428 481 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 TSPAN8P19075 237 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 ZNF135P52742 658 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 PPP2R2BQ00005 443 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 ILF2Q12905 390 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 TOP3AQ13472 1001 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 OTUD3Q5T2D3 398 aaPredicted RBP12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 AGMOQ6ZNB7 445 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 NANOGNBQ7Z5D8 188 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 RBM23Q86U06 439 aaKnown RBP12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 FAR1Q8WVX9 515 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 YIPF6Q96EC8 236 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 TSPAN17Q96FV3 270 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 TEX37Q96LM6 180 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 DUSP16Q9BY84 665 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 HOXC10Q9NYD6 342 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 COX16Q9P0S2 106 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 USP22Q9UPT9 525 aa12.05□□□□□ -0.48
SMARCAL1-201ENST00000357276 TTC34A8MYJ7 566 aa12.04□□□□□ -0.48
SMARCAL1-201ENST00000357276 LSM1O15116 133 aaKnown RBP12.04□□□□□ -0.48
SMARCAL1-201ENST00000357276 NUAK1O60285 661 aa12.04□□□□□ -0.48
SMARCAL1-201ENST00000357276 HUS1O60921 280 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms