RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 USP41Q3LFD5 358 aa13.55□□□□□ -0.24
TRIM4-203ENST00000355947 NOL9Q5SY16 702 aaKnown RBP13.55□□□□□ -0.24
TRIM4-203ENST00000355947 UNC93AQ86WB7 457 aa13.55□□□□□ -0.24
TRIM4-203ENST00000355947 CIR1Q86X95 450 aaPredicted RBP13.55□□□□□ -0.24
TRIM4-203ENST00000355947 SYTL1Q8IYJ3 562 aa13.55□□□□□ -0.24
TRIM4-203ENST00000355947 FBXO39Q8N4B4 442 aa13.55□□□□□ -0.24
TRIM4-203ENST00000355947 IL12RB2Q99665 862 aa13.55□□□□□ -0.24
TRIM4-203ENST00000355947 MEAF6Q9HAF1 191 aa13.55□□□□□ -0.24
TRIM4-203ENST00000355947 SP110Q9HB58 689 aa13.55□□□□□ -0.24
TRIM4-203ENST00000355947 ZFP14Q9HCL3 533 aa13.55□□□□□ -0.24
TRIM4-203ENST00000355947 PCDHB3Q9Y5E6 796 aa13.55□□□□□ -0.24
TRIM4-203ENST00000355947 TARM1B6A8C7 271 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 CLDN25C9JDP6 229 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 BTN3A1O00481 513 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 MTSS1O43312 755 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 CST1P01037 141 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 GSNP06396 782 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 RFC2P35250 354 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 HPCAL1P37235 193 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 NR4A2P43354 598 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 GJA8P48165 433 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 CCT8P50990 548 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 AFF1P51825 1210 aaKnown RBP13.54□□□□□ -0.24
TRIM4-203ENST00000355947 GEMP55040 296 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 MIB1Q86YT6 1006 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 EFHBQ8N7U6 833 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 KLRG1Q96E93 195 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 CCDC97Q96F63 343 aaPredicted RBP13.54□□□□□ -0.24
TRIM4-203ENST00000355947 PCED1BQ96HM7 432 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 ZNF419Q96HQ0 510 aaPredicted RBP13.54□□□□□ -0.24
TRIM4-203ENST00000355947 C12orf42Q96LP6 360 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 TMEM30AQ9NV96 361 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 CD274Q9NZQ7 290 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 MTRRQ9UBK8 725 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 FBXW11Q9UKB1 542 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 SLC22A2O15244 555 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 DYNC1LI2O43237 492 aaPredicted RBP13.54□□□□□ -0.24
TRIM4-203ENST00000355947 DEAF1O75398 565 aaPredicted RBP13.54□□□□□ -0.24
TRIM4-203ENST00000355947 C1RP00736 705 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 FYNP06241 537 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 CYP2C9P11712 490 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 TCEA1P23193 301 aaKnown RBP13.54□□□□□ -0.24
TRIM4-203ENST00000355947 VAC14Q08AM6 782 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 PPIL2Q13356 520 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 NR6A1Q15406 480 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 TSNQ15631 228 aaKnown RBP13.54□□□□□ -0.24
TRIM4-203ENST00000355947 KCTD11Q693B1 232 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 NOTUMQ6P988 496 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 LARP4Q71RC2 724 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRIM4-203ENST00000355947 SLC22A16Q86VW1 577 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 PLD3Q8IV08 490 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 FAM86B1Q8N7N1 296 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 OR13C4Q8NGS5 318 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 CCDC126Q96EE4 140 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 TSPAN17Q96FV3 270 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 SMIM14Q96QK8 99 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 ROGDIQ9GZN7 287 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 ERGIC3Q9Y282 383 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 ARL5AQ9Y689 179 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 BCAS1O75363 584 aaPredicted RBP13.54□□□□□ -0.24
TRIM4-203ENST00000355947 RASAL1O95294 804 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 GUCA1CO95843 209 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 CHEK2O96017 543 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 ZNF37AP17032 561 aaPredicted RBP13.54□□□□□ -0.24
TRIM4-203ENST00000355947 ATP6AP1Q15904 470 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 ZNF678Q5SXM1 525 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 TMEM207Q6UWW9 146 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 GPR152Q8TDT2 470 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 MYRFLQ96LU7 910 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 CSF3RQ99062 836 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 VRTNQ9H8Y1 702 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 HMG20AQ9NP66 347 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 GIN1Q9NXP7 522 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 ACTR3BQ9P1U1 418 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 SEPT3Q9UH03 358 aa13.54□□□□□ -0.24
TRIM4-203ENST00000355947 NCAM2O15394 837 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 TBX1O43435 398 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 DAOAP59103 153 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 SELPLGQ14242 412 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 UGT3A2Q3SY77 523 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 NIPAL1Q6NVV3 410 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 THAP5Q7Z6K1 395 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 SLC22A9Q8IVM8 553 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 CCDC103Q8IW40 242 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 NDNFQ8TB73 568 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 FRS2Q8WU20 508 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 OSCP1Q8WVF1 389 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 RMDN1Q96DB5 314 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 MTFMTQ96DP5 389 aaKnown RBP13.53□□□□□ -0.24
TRIM4-203ENST00000355947 SNX27Q96L92 541 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 FCRL2Q96LA5 508 aaPredicted RBP13.53□□□□□ -0.24
TRIM4-203ENST00000355947 C11orf84Q9BUA3 381 aaPredicted RBP13.53□□□□□ -0.24
TRIM4-203ENST00000355947 WDR6Q9NNW5 1121 aaKnown RBP13.53□□□□□ -0.24
TRIM4-203ENST00000355947 RCOR3Q9P2K3 495 aaPredicted RBP13.53□□□□□ -0.24
TRIM4-203ENST00000355947 GALPQ9UBC7 116 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 UXTQ9UBK9 157 aaPredicted RBP13.53□□□□□ -0.24
TRIM4-203ENST00000355947 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRIM4-203ENST00000355947 PCDHGA8Q9Y5G5 932 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 SLC30A1Q9Y6M5 507 aa13.53□□□□□ -0.24
TRIM4-203ENST00000355947 WDR81Q562E7 1941 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms