RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 YBEYP58557 167 aaPredicted RBP10.35□□□□□ -0.75
SMPD4-201ENST00000351288 C12orf76Q8N812 135 aaPredicted RBP10.35□□□□□ -0.75
SMPD4-201ENST00000351288 CEP70Q8NHQ1 597 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 PPP2R3CQ969Q6 453 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 PTERQ96BW5 349 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 PHF12Q96QT6 1004 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 IL12RB2Q99665 862 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 MRPL57Q9BQC6 102 aaKnown RBP10.35□□□□□ -0.75
SMPD4-201ENST00000351288 HGH1Q9BTY7 390 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 ZFP14Q9HCL3 533 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 IGSF5Q9NSI5 407 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 UBAP1Q9NZ09 502 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 SLC8A2Q9UPR5 921 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 SORCS3Q9UPU3 1222 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 TMEM114B3SHH9 223 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 TARM1B6A8C7 271 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 CDC7O00311 574 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 RNASEH2AO75792 299 aaKnown RBP10.35□□□□□ -0.75
SMPD4-201ENST00000351288 HLA-DPA1P20036 260 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 ITGALP20701 1170 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 CLCN5P51795 746 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 CDKL1Q00532 357 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 SEMA3AQ14563 771 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 NR6A1Q15406 480 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 BBS7Q8IWZ6 715 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 KREMEN2Q8NCW0 462 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 PDZD8Q8NEN9 1154 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 HMGCLL1Q8TB92 370 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 METTL6Q8TCB7 284 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 CYB5D2Q8WUJ1 264 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 LRTOMTQ8WZ04 291 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 PGAP3Q96FM1 320 aaPredicted RBP10.35□□□□□ -0.75
SMPD4-201ENST00000351288 PRPF18Q99633 342 aaKnown RBP10.35□□□□□ -0.75
SMPD4-201ENST00000351288 CLSTN3Q9BQT9 956 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 TRIM4Q9C037 500 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 GRIP2Q9C0E4 1043 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 RAD54BQ9Y620 910 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 RALGAPA2Q2PPJ7 1873 aa10.35□□□□□ -0.75
SMPD4-201ENST00000351288 NYNRINQ9P2P1 1898 aaKnown RBP10.34□□□□□ -0.75
SMPD4-201ENST00000351288 IPO13O94829 963 aaKnown RBP10.34□□□□□ -0.75
SMPD4-201ENST00000351288 CLTBP09497 229 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 UQCRBP14927 111 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 CKMT2P17540 419 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 PSMC3P17980 439 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 GSTT1P30711 240 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 ZNF423Q2M1K9 1284 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 NADSYN1Q6IA69 706 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 GFM2Q969S9 779 aaKnown RBP10.34□□□□□ -0.75
SMPD4-201ENST00000351288 PPP1R2P1Q96PQ5 205 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 MYOCQ99972 504 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 EFCAB1Q9HAE3 211 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 ZBTB26Q9HCK0 441 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 SPATS2LQ9NUQ6 558 aaKnown RBP10.34□□□□□ -0.75
SMPD4-201ENST00000351288 SPO11Q9Y5K1 396 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 SZT2Q5T011 3432 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 C15orf38-AP3S2A0A0A6YYH1 394 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 LIN7AO14910 233 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-201ENST00000351288 AKAP10O43572 662 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 RPP40O75818 363 aaKnown RBP10.34□□□□□ -0.75
SMPD4-201ENST00000351288 FGF18O76093 207 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 HGFP14210 728 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 ADRA1AP35348 466 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 CDH4P55283 916 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 IL2P60568 153 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 ST8SIA6P61647 398 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 VPS26BQ4G0F5 336 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 PABPC1LQ4VXU2 614 aaKnown RBP10.34□□□□□ -0.75
SMPD4-201ENST00000351288 TMEM259Q4ZIN3 620 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 ANKS6Q68DC2 871 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 SLC39A5Q6ZMH5 540 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 ARPINQ7Z6K5 226 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 GPSM1Q86YR5 675 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 APCDD1Q8J025 514 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 TMEM199Q8N511 208 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 KLHL23Q8NBE8 558 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 DNAJB14Q8TBM8 379 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 NCLNQ969V3 563 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 CIB1Q99828 191 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 MCMBPQ9BTE3 642 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 SPATA16Q9BXB7 569 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 PRDM16Q9HAZ2 1276 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 TMEM248Q9NWD8 314 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 STK39Q9UEW8 545 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 SLCO3A1Q9UIG8 710 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 WNT6Q9Y6F9 365 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 SLC4A7Q9Y6M7 1214 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 TRAV19A0A0A6YYK7 116 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 TRPC5OSA6NMA1 111 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 ZNF839A8K0R7 811 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 TRIM24O15164 1050 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 CLDN7O95471 211 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 PRAMEF1O95521 474 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 GLUD1P00367 558 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 ME2P23368 584 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 GDF5P43026 501 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 PSME3P61289 254 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 IRF5Q13568 498 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 MTX3Q5HYI7 312 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 TMTC4Q5T4D3 741 aa10.34□□□□□ -0.75
SMPD4-201ENST00000351288 MYO1HQ8N1T3 1032 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms