RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 C8orf59Q8N0T1 100 aaPredicted RBP10.61□□□□□ -0.71
CAPN3-203ENST00000349748 LRRC71Q8N4P6 559 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 TRPV3Q8NET8 790 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 SLC7A6Q92536 515 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 RORBQ92753 470 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 SIGLEC10Q96LC7 697 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 SEPHS2Q99611 448 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 SH2D3AQ9BRG2 576 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 MXRA8Q9BRK3 442 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 MMP28Q9H239 520 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 ERVK13-1Q9NX77 482 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 SLC23A1Q9UHI7 598 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 RNF112Q9ULX5 631 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 RAP2CQ9Y3L5 183 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 PCDHGB6Q9Y5F9 930 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 A0A0U1RQS6 177 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 SLC12A8A0AV02 714 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 MAGEB16A2A368 324 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 HMX3A6NHT5 357 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 H0YAE9 185 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 NME4O00746 187 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 NCK1P16333 377 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 ATP5OP48047 213 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 GRIA4P48058 902 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 NKX3-2P78367 333 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 POU5F1BQ06416 359 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 COX10Q12887 443 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 STX5Q13190 355 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 FASTKQ14296 549 aaKnown RBP10.61□□□□□ -0.71
CAPN3-203ENST00000349748 PDK2Q15119 407 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 PLEKHG6Q3KR16 790 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 FAM209BQ5JX69 171 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 LRRC38Q5VT99 294 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 IFNEQ86WN2 208 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 FBXL13Q8NEE6 735 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 RIT1Q92963 219 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 MFSD3Q96ES6 412 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 CDCA5Q96FF9 252 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 EBNA1BP2Q99848 306 aaKnown RBP10.61□□□□□ -0.71
CAPN3-203ENST00000349748 SEC22CQ9BRL7 303 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 DCSTAMPQ9H295 470 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 TNFRSF10DQ9UBN6 386 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 AASSQ9UDR5 926 aa10.61□□□□□ -0.71
CAPN3-203ENST00000349748 H3BQ06 376 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-203ENST00000349748 SMLR1H3BR10 107 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 NUPL2O15504 423 aaKnown RBP10.6□□□□□ -0.71
CAPN3-203ENST00000349748 RGS5O15539 181 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 KCNN4O15554 427 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 ARHGEF9O43307 516 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 CALB1P05937 261 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 KRT19P08727 400 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 PIGAP37287 484 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 NAGLUP54802 743 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 SNAP25P60880 206 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 CD47Q08722 323 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 TRAF3Q13114 568 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 BTN1A1Q13410 526 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 STARD3Q14849 445 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 VARS2Q5ST30 1063 aaKnown RBP10.6□□□□□ -0.71
CAPN3-203ENST00000349748 CFAP77Q6ZQR2 320 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 BNIPLQ7Z465 357 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 RAB43Q86YS6 212 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 TRIM48Q8IWZ4 208 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 ST13P5Q8NFI4 369 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-203ENST00000349748 SLC2A14Q8TDB8 520 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 MARVELD3Q96A59 401 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 YIPF6Q96EC8 236 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 PGLYRP2Q96PD5 576 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 KIFC1Q9BW19 673 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 KATNAL1Q9BW62 490 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 CDADC1Q9BWV3 514 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 TDRD3Q9H7E2 651 aaKnown RBP10.6□□□□□ -0.71
CAPN3-203ENST00000349748 CAB39LQ9H9S4 337 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 FAM8A1Q9UBU6 413 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 SARDHQ9UL12 918 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 TBC1D24Q9ULP9 559 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 PLIN4Q96Q06 1357 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 WDR27A2RRH5 827 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 ZNF98A6NK75 572 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 SOAT2O75908 522 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 LRIG2O94898 1065 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 OR5F1O95221 314 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 MT-CO1P00395 513 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 PRIM2P49643 509 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 ATN1P54259 1190 aaPredicted RBP10.6□□□□□ -0.71
CAPN3-203ENST00000349748 NFIAQ12857 509 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 KRR1Q13601 381 aaKnown RBP10.6□□□□□ -0.71
CAPN3-203ENST00000349748 TFDP2Q14188 446 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 CAPRIN1Q14444 709 aaKnown RBP10.6□□□□□ -0.71
CAPN3-203ENST00000349748 PCBP1Q15365 356 aaKnown RBP eCLIP10.6□□□□□ -0.71
CAPN3-203ENST00000349748 PTCHD3Q3KNS1 767 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 ANKRD34AQ69YU3 496 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 PPP1R18Q6NYC8 613 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 ZBTB33Q86T24 672 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 TLK2Q86UE8 772 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 CLEC4FQ8N1N0 589 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 LENG9Q96B70 501 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 CPXM1Q96SM3 734 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 VAV3Q9UKW4 847 aa10.6□□□□□ -0.71
CAPN3-203ENST00000349748 HSPB11Q9Y547 144 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms