RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 FBXL20Q96IG2 436 aa15.82■□□□□ 0.12
HMGA1-202ENST00000347617 TEKT5Q96M29 485 aa15.82■□□□□ 0.12
HMGA1-202ENST00000347617 TSGA13Q96PP4 275 aa15.82■□□□□ 0.12
HMGA1-202ENST00000347617 NPY6RQ99463 290 aa15.82■□□□□ 0.12
HMGA1-202ENST00000347617 PAAF1Q9BRP4 392 aa15.82■□□□□ 0.12
HMGA1-202ENST00000347617 CNGB3Q9NQW8 809 aa15.82■□□□□ 0.12
HMGA1-202ENST00000347617 TMEM45AQ9NWC5 275 aa15.82■□□□□ 0.12
HMGA1-202ENST00000347617 A8MT66 165 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 J3QRK9 145 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 KCNK1O00180 336 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 ENPP3O14638 875 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 PFDN6O15212 129 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 KDM1AO60341 852 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 FOXD2O60548 495 aaPredicted RBP15.81■□□□□ 0.12
HMGA1-202ENST00000347617 UGT2B4P06133 528 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 LCP1P13796 627 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 NFKB1P19838 968 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 CD68P34810 354 aaPredicted RBP15.81■□□□□ 0.12
HMGA1-202ENST00000347617 AVPR1AP37288 418 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 EEFSECP57772 596 aaKnown RBP15.81■□□□□ 0.12
HMGA1-202ENST00000347617 C1QTNF8P60827 252 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 GRIK2Q13002 908 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 ACAP2Q15057 778 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 C1orf53Q5VUE5 145 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 LAYNQ6UX15 382 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 ANKRD33Q7Z3H0 272 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 FAM35AQ86V20 835 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 PROSER1Q86XN7 944 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 SPPL2CQ8IUH8 684 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 TMCO5AQ8N6Q1 288 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 C2CD4AQ8NCU7 369 aaPredicted RBP15.81■□□□□ 0.12
HMGA1-202ENST00000347617 HEXDCQ8WVB3 486 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 SNX19Q92543 992 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 HDAC2Q92769 488 aaKnown RBP15.81■□□□□ 0.12
HMGA1-202ENST00000347617 FBXL8Q96CD0 374 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 MOCOSQ96EN8 888 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 SMARCD1Q96GM5 515 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 PCED1BQ96HM7 432 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 ELMO2Q96JJ3 720 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 ALPK1Q96QP1 1244 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 PKMYT1Q99640 499 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 RTP3Q9BQQ7 232 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 MED10Q9BTT4 135 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 MAGEB5Q9BZ81 275 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 PRKD2Q9BZL6 878 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 MUC3BQ9H195 1237 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 RMI1Q9H9A7 625 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 FANCEQ9HB96 536 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 HPS4Q9NQG7 708 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 VWA7Q9Y334 891 aa15.81■□□□□ 0.12
HMGA1-202ENST00000347617 A0A0J9YYE9 177 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 MYBPHLA2RUH7 354 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 HOXA2O43364 376 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 CACNG3O60359 315 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 LTA4HP09960 611 aaKnown RBP15.8■□□□□ 0.12
HMGA1-202ENST00000347617 GSTT2P0CG29 244 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 GSTT2BP0CG30 244 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 HNRNPLP14866 589 aaKnown RBP eCLIP15.8■□□□□ 0.12
HMGA1-202ENST00000347617 PTPN2P17706 415 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 IMPDH1P20839 514 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 MATN1P21941 496 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 FUT4P22083 530 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 ARCN1P48444 511 aaKnown RBP15.8■□□□□ 0.12
HMGA1-202ENST00000347617 CLCN5P51795 746 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 HNRNPFP52597 415 aaKnown RBP15.8■□□□□ 0.12
HMGA1-202ENST00000347617 NME3Q13232 169 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 GPNMBQ14956 572 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 SLC14A2Q15849 920 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 CLLU1OSQ5K130 101 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 GTF2IRD2BQ6EKJ0 949 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 KIAA0930Q6ICG6 404 aaPredicted RBP15.8■□□□□ 0.12
HMGA1-202ENST00000347617 GALNT7Q86SF2 657 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 GTF2IRD2Q86UP8 949 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 FUNDC1Q8IVP5 155 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 CLYBLQ8N0X4 340 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 PIK3C3Q8NEB9 887 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 ABHD11Q8NFV4 315 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 CALML6Q8TD86 181 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 CLEC4CQ8WTT0 213 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 BTN2A3PQ96KV6 586 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 UBXN10Q96LJ8 280 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 TOX2Q96NM4 488 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 NAA50Q9GZZ1 169 aaKnown RBP15.8■□□□□ 0.12
HMGA1-202ENST00000347617 IGSF5Q9NSI5 407 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 CORINQ9Y5Q5 1042 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 UBXN8O00124 270 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 NBNO60934 754 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 ANXA9O76027 345 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 ERCC2P18074 760 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 RPL10P27635 214 aaKnown RBP15.8■□□□□ 0.12
HMGA1-202ENST00000347617 NFKB2Q00653 900 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 SEMA3BQ13214 749 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 INAQ16352 499 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 CYP2A13Q16696 494 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 TTC23Q5W5X9 447 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 PRR23BQ6ZRT6 265 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 BEND5Q7L4P6 421 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 CEP97Q8IW35 865 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 C19orf60Q96EN9 201 aa15.8■□□□□ 0.12
HMGA1-202ENST00000347617 SH3YL1Q96HL8 342 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms