RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 AKAP7Q9P0M2 348 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 KLQ9UEF7 1012 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 DPYSL4O14531 572 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 KPNA5O15131 536 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PLOD3O60568 738 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 RASAL1O95294 804 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 FGF1P05230 155 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 TBX4P57082 545 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 CGB2Q6NT52 195 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 TREML1Q86YW5 311 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 SLC45A3Q96JT2 553 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF512Q96ME7 567 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 MLPHQ9BV36 600 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ITPAQ9BY32 194 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 B3GNT5Q9BYG0 378 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 SLX4Q8IY92 1834 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 FUOMA2VDF0 154 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 FAM149AA5PLN7 773 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 MATN3O15232 486 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 FTH1P02794 183 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 OR1G1P47890 313 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ACLYP53396 1101 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 FGD3Q5JSP0 725 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 ZCCHC8Q6NZY4 707 aaKnown RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 NRG4Q8WWG1 115 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 FBXO32Q969P5 355 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 KCTD15Q96SI1 283 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-203ENST00000343508 GPR22Q99680 433 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PRDM8Q9NQV8 689 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 PHF11Q9UIL8 331 aa4.77□□□□□ -1.65
CSMD3-203ENST00000343508 CAPN14A8MX76 684 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 RECQL4O94761 1208 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 DHFRP00374 187 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 YES1P07947 543 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 RHOCP08134 193 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 ANXA5P08758 320 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 FGF3P11487 239 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-203ENST00000343508 ENTPD1P49961 510 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 CTC1Q2NKJ3 1217 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 AP5B1Q2VPB7 878 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 ANXA8L1Q5VT79 327 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 ANKRD23Q86SG2 305 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 PIGZQ86VD9 579 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 HID1Q8IV36 788 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 MICALL2Q8IY33 904 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 ZZZ3Q8IYH5 903 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 PHTF2Q8N3S3 785 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 BCL7BQ9BQE9 202 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 AHSPQ9NZD4 102 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 ZNF624Q9P2J8 865 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-203ENST00000343508 MBD2Q9UBB5 411 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 RWDD3Q9Y3V2 267 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 NRCAMQ92823 1304 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 QSOX1O00391 747 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 NOS1APO75052 506 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-203ENST00000343508 MZF1P28698 734 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-203ENST00000343508 CRATP43155 626 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 IST1P53990 364 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 NFE2Q16621 373 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-203ENST00000343508 TIGD6Q17RP2 521 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 GPR158Q5T848 1215 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 CDC73Q6P1J9 531 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 PTCHD4Q6ZW05 846 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 DET1Q7L5Y6 550 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 HEXDCQ8WVB3 486 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 SPATA5L1Q9BVQ7 753 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 COLEC11Q9BWP8 271 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 ANKRD60Q9BZ19 345 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 ABI2Q9NYB9 513 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-203ENST00000343508 CYP4B1P13584 511 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 TRIM40Q6P9F5 258 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 ANKFN1Q8N957 763 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 COPS4Q9BT78 406 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 SP140LQ9H930 580 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 APOBEC3GQ9HC16 384 aaKnown RBP4.76□□□□□ -1.65
CSMD3-203ENST00000343508 NECTIN3Q9NQS3 549 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 ARMC1Q9NVT9 282 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 A0A1W2PP18 115 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 RBM47A0AV96 593 aaKnown RBP4.76□□□□□ -1.65
CSMD3-203ENST00000343508 METTL18O95568 372 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 NR2F6P10588 404 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 SLC6A2P23975 617 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 CD97P48960 835 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 STX4Q12846 297 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 IL18R1Q13478 541 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 SNAPC2Q13487 334 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 GRIK4Q16099 956 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 DNAJC14Q6Y2X3 702 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-203ENST00000343508 GALNT5Q7Z7M9 940 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 RIOX2Q8IUF8 465 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 GLIS1Q8NBF1 620 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 CCDC177Q9NQR7 707 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-203ENST00000343508 VPS4AQ9UN37 437 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 PTPRJQ12913 1337 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 COL22A1Q8NFW1 1626 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-203ENST00000343508 FAM234BA2RU67 622 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 AKAP5P24588 427 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 GRM5P41594 1212 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 SLC16A1P53985 500 aa4.76□□□□□ -1.65
CSMD3-203ENST00000343508 OXCT1P55809 520 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms