RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PDZK1P1A8MUH7 402 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 E7ENX8 843 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 GPIP06744 558 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 RPS9P46781 194 aaKnown RBP7.15□□□□□ -1.26
VCAN-202ENST00000342785 ANXA11P50995 505 aaKnown RBP7.15□□□□□ -1.26
VCAN-202ENST00000342785 RFX4Q33E94 735 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 TMEM63BQ5T3F8 832 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 OR9I1Q8NGQ6 314 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 NPLOC4Q8TAT6 608 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 CANT1Q8WVQ1 401 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 STARD8Q92502 1023 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 MYO19Q96H55 970 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 GORASP1Q9BQQ3 440 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 KIFC1Q9BW19 673 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 C6orf62Q9GZU0 229 aaPredicted RBP7.15□□□□□ -1.26
VCAN-202ENST00000342785 HMG20AQ9NP66 347 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 MRPL17Q9NRX2 175 aaKnown RBP7.15□□□□□ -1.26
VCAN-202ENST00000342785 EIF2B4Q9UI10 523 aaKnown RBP7.15□□□□□ -1.26
VCAN-202ENST00000342785 FAM220BPB1ANY3 271 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 H3BN98 237 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 INSIG1O15503 277 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 SEPT4O43236 478 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 CCNA2P20248 432 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 DGUOKQ16854 277 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 ZNF792Q3KQV3 632 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 FGD3Q5JSP0 725 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 IFNLR1Q8IU57 520 aaPredicted RBP7.15□□□□□ -1.26
VCAN-202ENST00000342785 CDKN2AIPNLQ96HQ2 116 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 ADGRE2Q9UHX3 823 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 SAMHD1Q9Y3Z3 626 aaKnown RBP7.15□□□□□ -1.26
VCAN-202ENST00000342785 PCDHB1Q9Y5F3 818 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 KCNE2Q9Y6J6 123 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 A0A0U1RQF3 1178 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 ESR1P03372 595 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 EDN1P05305 212 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 CNPP09543 421 aaKnown RBP7.15□□□□□ -1.26
VCAN-202ENST00000342785 CCNFP41002 786 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 CRATP43155 626 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 ETV4P43268 484 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 CCR10P46092 362 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 MSANTD2Q6P1R3 559 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 CYP4Z1Q86W10 505 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 DBF4BQ8NFT6 615 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 FEM1CQ96JP0 617 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 SLC39A3Q9BRY0 314 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 ADI1Q9BV57 179 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 ETAA1Q9NY74 926 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 SPG21Q9NZD8 308 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 GTF2IRD1Q9UHL9 959 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 CLCA2Q9UQC9 943 aa7.15□□□□□ -1.26
VCAN-202ENST00000342785 SNTNA6NMZ2 147 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 J3KR12 359 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 IFRD1O00458 451 aaPredicted RBP7.15□□□□□ -1.27
VCAN-202ENST00000342785 PROZP22891 400 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 PPP2R1BP30154 601 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 GRK3P35626 688 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 GMPRP36959 345 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 USP46P62068 366 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 FUT10Q6P4F1 479 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 SATL1Q86VE3 508 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 CROCCP3Q8IVE0 287 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 UPF1Q92900 1129 aaKnown RBP eCLIP7.15□□□□□ -1.27
VCAN-202ENST00000342785 LRTM1Q9HBL6 345 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 PCDH12Q9NPG4 1184 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 RPS6KA6Q9UK32 745 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 LTBP3Q9NS15 1303 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 KPNA4O00629 521 aaPredicted RBP7.15□□□□□ -1.27
VCAN-202ENST00000342785 DNAJA2O60884 412 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 FESP07332 822 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 T-ENOLP0DO92 83 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 UROSP10746 265 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 NCK1P16333 377 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 SOX6P35712 828 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 SIM2Q14190 667 aaPredicted RBP7.15□□□□□ -1.27
VCAN-202ENST00000342785 INTS11Q5TA45 600 aaKnown RBP7.15□□□□□ -1.27
VCAN-202ENST00000342785 ZNF605Q86T29 641 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 CACUL1Q86Y37 369 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 TP53INP2Q8IXH6 220 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 GPR156Q8NFN8 814 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 CEP44Q9C0F1 390 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 CXorf21Q9HAI6 301 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 MKS1Q9NXB0 559 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 KCTD3Q9Y597 815 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 SYN3O14994 580 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 BEST1O76090 585 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 MED26O95402 600 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 PRAMEF1O95521 474 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 ABRQ12979 859 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 TOP3AQ13472 1001 aaPredicted RBP7.15□□□□□ -1.27
VCAN-202ENST00000342785 SPIDRQ14159 915 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 SETMARQ53H47 684 aaPredicted RBP7.15□□□□□ -1.27
VCAN-202ENST00000342785 TMEM214Q6NUQ4 689 aaKnown RBP7.15□□□□□ -1.27
VCAN-202ENST00000342785 TMEM135Q86UB9 458 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 PROSER1Q86XN7 944 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 OFCC1Q8IZS5 231 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 ASB9Q96DX5 294 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 PLEKHG4BQ96PX9 1271 aa7.15□□□□□ -1.27
VCAN-202ENST00000342785 FBRSL1Q9HCM7 1045 aaKnown RBP7.15□□□□□ -1.27
VCAN-202ENST00000342785 TTC24A2A3L6 582 aaPredicted RBP7.14□□□□□ -1.27
VCAN-202ENST00000342785 RPL17P18621 184 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms