RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SIP14410 1827 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 A0A1W2PQ72 361 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 G3V2T6 193 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 K7ERI5 159 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 UPK1AO00322 258 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 CAPN5O15484 640 aaPredicted RBP18.44■□□□□ 0.54
SMPD1-201ENST00000342245 B4GALT4O60513 344 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 PLA2G6O60733 806 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 RAP2AP10114 183 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 SDC4P31431 198 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 SOX10P56693 466 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 RAB10P61026 200 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 ISL1P61371 349 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 POU5F1BQ06416 359 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 PIGFQ07326 219 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 ZNF691Q5VV52 312 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 OR6B2Q6IFH4 312 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 FAM122CQ6P4D5 195 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 XKRXQ6PP77 449 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 FAM35AQ86V20 835 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 DCP1BQ8IZD4 617 aaKnown RBP18.44■□□□□ 0.54
SMPD1-201ENST00000342245 CELF2-AS1Q8N7Q2 184 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 FBLIM1Q8WUP2 373 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 GPR78Q96P69 363 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 OSBPL2Q9H1P3 480 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 CCNB1IP1Q9NPC3 277 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 PIH1D1Q9NWS0 290 aaKnown RBP18.44■□□□□ 0.54
SMPD1-201ENST00000342245 TOR4AQ9NXH8 423 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 KCNH4Q9UQ05 1017 aa18.44■□□□□ 0.54
SMPD1-201ENST00000342245 AXIN1O15169 862 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 ALOX12P18054 663 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 NPY2RP49146 381 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 LIPEQ05469 1076 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 NFIAQ12857 509 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 CLCA4Q14CN2 919 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 SMAD1Q15797 465 aaKnown RBP18.43■□□□□ 0.54
SMPD1-201ENST00000342245 CA9Q16790 459 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 FAM98BQ52LJ0 330 aaKnown RBP18.43■□□□□ 0.54
SMPD1-201ENST00000342245 TPRG1LQ5T0D9 272 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 ZNF470Q6ECI4 717 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 TRNP1Q6NT89 227 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 SCARA5Q6ZMJ2 495 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 OSTM1Q86WC4 334 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 TXNDC5Q8NBS9 432 aaKnown RBP18.43■□□□□ 0.54
SMPD1-201ENST00000342245 FAM83FQ8NEG4 500 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-201ENST00000342245 MCOLN3Q8TDD5 553 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 GIMAP1Q8WWP7 306 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 LRCH3Q96II8 777 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 RNF170Q96K19 258 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 MBOAT4Q96T53 435 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 CCDC32Q9BV29 185 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 DCSTAMPQ9H295 470 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 IARS2Q9NSE4 1012 aaKnown RBP18.43■□□□□ 0.54
SMPD1-201ENST00000342245 MAGEL2Q9UJ55 1249 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 C3orf18Q9UK00 162 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 PCDHA10Q9Y5I2 948 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 EFCAB9A8MZ26 197 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 M0QYV0 167 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 HNRNPLP14866 589 aaKnown RBP eCLIP18.43■□□□□ 0.54
SMPD1-201ENST00000342245 ALDH4A1P30038 563 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 HTR2BP41595 481 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 CXCR4P61073 352 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 PTPN11Q06124 597 aaPredicted RBP18.43■□□□□ 0.54
SMPD1-201ENST00000342245 RFX4Q33E94 735 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 PARP16Q8N5Y8 322 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 SETD9Q8NE22 299 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 SLC2A14Q8TDB8 520 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 SEPHS2Q99611 448 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 COA1Q9GZY4 146 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 WDR6Q9NNW5 1121 aaKnown RBP18.43■□□□□ 0.54
SMPD1-201ENST00000342245 SCAF8Q9UPN6 1271 aaKnown RBP18.43■□□□□ 0.54
SMPD1-201ENST00000342245 PEX16Q9Y5Y5 336 aa18.43■□□□□ 0.54
SMPD1-201ENST00000342245 ERI2A8K979 691 aaKnown RBP18.42■□□□□ 0.54
SMPD1-201ENST00000342245 PDPK1O15530 556 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 GSTM1P09488 218 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 JUNDP17535 347 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 CYP2A7P20853 494 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 PSMB4P28070 264 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 ETV6P41212 452 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 MFSD10Q14728 455 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 ESCO2Q56NI9 601 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 UBE2Q1Q7Z7E8 422 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 FAM160B2Q86V87 743 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 SP8Q8IXZ3 490 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 TMCO6Q96DC7 493 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 ZBTB45Q96K62 511 aaPredicted RBP18.42■□□□□ 0.54
SMPD1-201ENST00000342245 C8orf48Q96LL4 319 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 NSMCE2Q96MF7 247 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 IDI2Q9BXS1 227 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 REXO4Q9GZR2 422 aaKnown RBP18.42■□□□□ 0.54
SMPD1-201ENST00000342245 FBXL12Q9NXK8 326 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 SCN3BQ9NY72 215 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 DNMT3LQ9UJW3 386 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 BTBD3Q9Y2F9 522 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 LOC100130705A0A1B0GUX0 176 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 C12orf71A8MTZ7 269 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 ARHGEF9O43307 516 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 PRKD3O94806 890 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 STMN1P16949 149 aa18.42■□□□□ 0.54
SMPD1-201ENST00000342245 ITGA2P17301 1181 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms