RNA–Protein interactions for RNA: ENST00000341846.9

TRIM29-201, Transcript of tripartite motif containing 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM29, Length 3,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-201ENST00000341846 ERVFC1P60507 584 aa11.06□□□□□ -0.64
TRIM29-201ENST00000341846 NSUN2Q08J23 767 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRIM29-201ENST00000341846 CBX2Q14781 532 aaPredicted RBP11.06□□□□□ -0.64
TRIM29-201ENST00000341846 TRIP10Q15642 601 aa11.06□□□□□ -0.64
TRIM29-201ENST00000341846 LSM12Q3MHD2 195 aaKnown RBP11.06□□□□□ -0.64
TRIM29-201ENST00000341846 SEL1L3Q68CR1 1132 aa11.06□□□□□ -0.64
TRIM29-201ENST00000341846 PSAPL1Q6NUJ1 521 aa11.06□□□□□ -0.64
TRIM29-201ENST00000341846 METTL25Q8N6Q8 603 aa11.06□□□□□ -0.64
TRIM29-201ENST00000341846 RNF148Q8N7C7 305 aa11.06□□□□□ -0.64
TRIM29-201ENST00000341846 MRPS31Q92665 395 aaKnown RBP11.06□□□□□ -0.64
TRIM29-201ENST00000341846 PTERQ96BW5 349 aa11.06□□□□□ -0.64
TRIM29-201ENST00000341846 TCEAL4Q96EI5 215 aa11.06□□□□□ -0.64
TRIM29-201ENST00000341846 MYRFLQ96LU7 910 aa11.06□□□□□ -0.64
TRIM29-201ENST00000341846 TDRD1Q9BXT4 1180 aaKnown RBP11.06□□□□□ -0.64
TRIM29-201ENST00000341846 MFSD1Q9H3U5 465 aa11.06□□□□□ -0.64
TRIM29-201ENST00000341846 IL21Q9HBE4 155 aa11.06□□□□□ -0.64
TRIM29-201ENST00000341846 POLR3BQ9NW08 1133 aaPredicted RBP11.06□□□□□ -0.64
TRIM29-201ENST00000341846 SAGE1Q9NXZ1 904 aa11.06□□□□□ -0.64
TRIM29-201ENST00000341846 C15orf38-AP3S2A0A0A6YYH1 394 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 RPP40O75818 363 aaKnown RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 RHOBTB1O94844 696 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 TIMP1P01033 207 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 TFAP2AP05549 437 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 LTA4HP09960 611 aaKnown RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 LAG3P18627 525 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 PDAP1Q13442 181 aaKnown RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 FRG1Q14331 258 aaKnown RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 CCDC92Q53HC0 331 aaPredicted RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 AGAP9Q5VTM2 703 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 MRNIPQ6NTE8 343 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 RNF111Q6ZNA4 994 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 ARPINQ7Z6K5 226 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 PDSS2Q86YH6 399 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 SLC15A3Q8IY34 581 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 TCF25Q9BQ70 676 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 C11orf49Q9H6J7 331 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 MRM3Q9HC36 420 aaKnown RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 ANKRD6Q9Y2G4 727 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 WDR37Q9Y2I8 494 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 TYW5A2RUC4 315 aaKnown RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 A8MT66 165 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 ANKRD66B4E2M5 251 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 TARM1B6A8C7 271 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 H3BMM5 538 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 UBXN8O00124 270 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 TRIM24O15164 1050 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 STX7O15400 261 aaKnown RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 NDUFS3O75489 264 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 SRP72O76094 671 aaKnown RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 COL6A2P12110 1019 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 UQCRBP14927 111 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 CCR2P41597 374 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 CTSOP43234 321 aaPredicted RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 SH3BGRP55822 239 aaPredicted RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 NAA20P61599 178 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 SULT2A1Q06520 285 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 PTPRNQ16849 979 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 PFKFB4Q16877 469 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 PAQR3Q6TCH7 311 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 LENG8Q96PV6 779 aaPredicted RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 MRPL57Q9BQC6 102 aaKnown RBP11.05□□□□□ -0.64
TRIM29-201ENST00000341846 DRC3Q9H069 523 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 CCDC68Q9H2F9 335 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 ADAMTS6Q9UKP5 1117 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 PTGDR2Q9Y5Y4 395 aa11.05□□□□□ -0.64
TRIM29-201ENST00000341846 PER2O15055 1255 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 CFLARO15519 480 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 NIPSNAP2O75323 286 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 MC4RP32245 332 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 CD70P32970 193 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 CLCN5P51795 746 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 CHN2P52757 468 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 MTTPP55157 894 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 NME5P56597 212 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 NTHL1P78549 312 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 GK3PQ14409 553 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 MYLK3Q32MK0 819 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 MAP7D1Q3KQU3 841 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 FRMD7Q6ZUT3 714 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 DDX53Q86TM3 631 aaKnown RBP11.04□□□□□ -0.64
TRIM29-201ENST00000341846 RBM23Q86U06 439 aaKnown RBP11.04□□□□□ -0.64
TRIM29-201ENST00000341846 HERC6Q8IVU3 1022 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRIM29-201ENST00000341846 NAT16Q8N8M0 369 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 GDPD5Q8WTR4 605 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 TRIB3Q96RU7 358 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 SLC30A3Q99726 388 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 GIMAP2Q9UG22 337 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 PLXNA3P51805 1871 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 CAPN8A6NHC0 703 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 C2orf81A6NN90 581 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 LSM1O15116 133 aaKnown RBP11.04□□□□□ -0.64
TRIM29-201ENST00000341846 GRID2O43424 1007 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 FOXD2O60548 495 aaPredicted RBP11.04□□□□□ -0.64
TRIM29-201ENST00000341846 CRTAMO95727 393 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 ARL1P40616 181 aaPredicted RBP11.04□□□□□ -0.64
TRIM29-201ENST00000341846 STT3AP46977 705 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 ACTR3P61158 418 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 KRT72Q14CN4 511 aa11.04□□□□□ -0.64
TRIM29-201ENST00000341846 PPP1R3AQ16821 1122 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms