RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PDP2Q9P2J9 529 aa18.83■□□□□ 0.6
RFTN1-201ENST00000334133 SNX13Q9Y5W8 968 aa18.83■□□□□ 0.6
RFTN1-201ENST00000334133 C15orf38-AP3S2A0A0A6YYH1 394 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 TMCC1O94876 653 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 NELFEP18615 380 aaKnown RBP18.82■□□□□ 0.6
RFTN1-201ENST00000334133 CR2P20023 1033 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 OGNP20774 298 aaKnown RBP18.82■□□□□ 0.6
RFTN1-201ENST00000334133 CAPN3P20807 821 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 CASP2P42575 452 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 TYSND1Q2T9J0 566 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 SPOUT1Q5T280 376 aaKnown RBP18.82■□□□□ 0.6
RFTN1-201ENST00000334133 ARPINQ7Z6K5 226 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 SPDYE1Q8NFV5 336 aaPredicted RBP18.82■□□□□ 0.6
RFTN1-201ENST00000334133 STAG3L4Q8TBR4 150 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 ASB9Q96DX5 294 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 PLK2Q9NYY3 685 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 POLG2Q9UHN1 485 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 CASP8AP2Q9UKL3 1982 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 PRSS51A0A1B0GVH4 220 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 ZNF839A8K0R7 811 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 ANKRD66B4E2M5 251 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 SLC26A3P40879 764 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 RAD51Q06609 339 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 RPS6KA2Q15349 733 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 CXorf57Q6NSI4 855 aaKnown RBP18.82■□□□□ 0.6
RFTN1-201ENST00000334133 IYDQ6PHW0 289 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 FAM126BQ8IXS8 530 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 NUDT8Q8WV74 236 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 FUBP1Q96AE4 644 aaKnown RBP18.82■□□□□ 0.6
RFTN1-201ENST00000334133 VPS33AQ96AX1 596 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 ZNF599Q96NL3 588 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 CLSTN3Q9BQT9 956 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 C1orf50Q9BV19 199 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 EPS15L1Q9UBC2 864 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 AP4B1Q9Y6B7 739 aa18.82■□□□□ 0.6
RFTN1-201ENST00000334133 H0Y626 953 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 STX7O15400 261 aaKnown RBP18.81■□□□□ 0.6
RFTN1-201ENST00000334133 CLDN11O75508 207 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 CD160O95971 181 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 GALNT1Q10472 559 aaPredicted RBP18.81■□□□□ 0.6
RFTN1-201ENST00000334133 MAPRE2Q15555 327 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 TAF1AQ15573 450 aaPredicted RBP18.81■□□□□ 0.6
RFTN1-201ENST00000334133 PLA2G4EQ3MJ16 856 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 AFTPHQ6ULP2 937 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 WFDC5Q8TCV5 224 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 TEX37Q96LM6 180 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 TTLL2Q9BWV7 592 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 ELAC1Q9H777 363 aaKnown RBP18.81■□□□□ 0.6
RFTN1-201ENST00000334133 TRPM5Q9NZQ8 1165 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 MAP10Q9P2G4 905 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 TRIM24O15164 1050 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 TBL1XO60907 577 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 LPOP22079 712 aaPredicted RBP18.81■□□□□ 0.6
RFTN1-201ENST00000334133 SUOXP51687 545 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 NFKB2Q00653 900 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 UGT2A3Q6UWM9 527 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 IFNEQ86WN2 208 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 KIAA1191Q96A73 305 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 EME1Q96AY2 570 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 LINGO1Q96FE5 620 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 TFB2MQ9H5Q4 396 aaKnown RBP18.81■□□□□ 0.6
RFTN1-201ENST00000334133 CREBZFQ9NS37 354 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 AP4S1Q9Y587 144 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 PEX1O43933 1283 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 TPST1O60507 370 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 KERAO60938 352 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 OR6B1O95007 311 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 ELAVL2Q12926 359 aaKnown RBP18.81■□□□□ 0.6
RFTN1-201ENST00000334133 RBBP7Q16576 425 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 CTSL3PQ5NE16 218 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 ADGRF1Q5T601 910 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 ZFP1Q6P2D0 407 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 PIP4K2CQ8TBX8 421 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 PPWD1Q96BP3 646 aaKnown RBP18.81■□□□□ 0.6
RFTN1-201ENST00000334133 SYTL2Q9HCH5 934 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 EIF2B4Q9UI10 523 aaKnown RBP18.81■□□□□ 0.6
RFTN1-201ENST00000334133 ZNF225Q9UK10 706 aa18.81■□□□□ 0.6
RFTN1-201ENST00000334133 F11P03951 625 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 GRIA3P42263 894 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 HK3P52790 923 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 BFSP2Q13515 415 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 USP41Q3LFD5 358 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 ALG1LQ6GMV1 187 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 ST13P4Q8IZP2 240 aaPredicted RBP18.8■□□□□ 0.6
RFTN1-201ENST00000334133 TMEM102Q8N9M5 508 aaPredicted RBP18.8■□□□□ 0.6
RFTN1-201ENST00000334133 SLCO4A1Q96BD0 722 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 PIF1Q9H611 641 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 CHD5Q8TDI0 1954 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 A0A1B0GVM2 712 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 E5RI56 91 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 TIPRLO75663 272 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 SNUPNO95149 360 aaKnown RBP18.8■□□□□ 0.6
RFTN1-201ENST00000334133 ATP6V1B1P15313 513 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 HOXD10P28358 340 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 CA5AP35218 305 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 CHN2P52757 468 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 SMAD3P84022 425 aaKnown RBP18.8■□□□□ 0.6
RFTN1-201ENST00000334133 NOGQ13253 232 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 MAP7D1Q3KQU3 841 aa18.8■□□□□ 0.6
RFTN1-201ENST00000334133 C6orf10Q5SRN2 563 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms