RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 GPR89BP0CG08 455 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 NR2C2P49116 596 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 ZBTB17Q13105 803 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 PCSK4Q6UW60 755 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 USP53Q70EK8 1073 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 TMPRSS9Q7Z410 1059 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 TRIM74Q86UV6 250 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 WDR24Q96S15 920 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 ZFYVE1Q9HBF4 777 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 RDH14Q9HBH5 336 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 MAGEE1Q9HCI5 957 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 SPTLC3Q9NUV7 552 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 NFKBIL1Q9UBC1 381 aaPredicted RBP17.97■□□□□ 0.47
RAB28-202ENST00000330852 ZNHIT2Q9UHR6 403 aa17.97■□□□□ 0.47
RAB28-202ENST00000330852 CNOT6Q9ULM6 557 aaKnown RBP17.97■□□□□ 0.47
RAB28-202ENST00000330852 INPP4BO15327 924 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 DNAJC6O75061 913 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 SLC2A4P14672 509 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 LIMK2P53671 638 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 DCDC1P59894 354 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 CFHR1Q03591 330 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 PDPK2PQ6A1A2 396 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 MARK2Q7KZI7 788 aaKnown RBP17.96■□□□□ 0.47
RAB28-202ENST00000330852 AVL9Q8NBF6 648 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 PATE1Q8WXA2 126 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 TTC9Q92623 222 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 SH3KBP1Q96B97 665 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 TRIB3Q96RU7 358 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 CARD9Q9H257 536 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 KCNK4Q9NYG8 393 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 PCDHB11Q9Y5F2 797 aa17.96■□□□□ 0.47
RAB28-202ENST00000330852 KALRNO60229 2985 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 IGHV1OR21-1A0A087WYE8 117 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 IGHV5-10-1A0A0J9YXX1 117 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.95■□□□□ 0.46
RAB28-202ENST00000330852 C1QL1O75973 258 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 KRT1P04264 644 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 PRB1P04280 392 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 ITIH1P19827 911 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 HADHBP55084 474 aaKnown RBP17.95■□□□□ 0.46
RAB28-202ENST00000330852 TFDP2Q14188 446 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 C16orf72Q14CZ0 275 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 CCDC70Q6NSX1 233 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 XKR5Q6UX68 686 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 ZNF574Q6ZN55 896 aaPredicted RBP17.95■□□□□ 0.46
RAB28-202ENST00000330852 RFX6Q8HWS3 928 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 SFRP1Q8N474 314 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 CCDC112Q8NEF3 446 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 LRRN4Q8WUT4 740 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 USP7Q93009 1102 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 TADA1Q96BN2 335 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 NUDT22Q9BRQ3 303 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 ZSCAN5AQ9BUG6 496 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 STN1Q9H668 368 aaKnown RBP17.95■□□□□ 0.46
RAB28-202ENST00000330852 PLEKHM1Q9Y4G2 1056 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 OR5K4A6NMS3 321 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 AKR1B15C9JRZ8 316 aaPredicted RBP17.95■□□□□ 0.46
RAB28-202ENST00000330852 CDK18Q07002 472 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 TEX44Q53QW1 395 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 TMEM71Q6P5X7 295 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 ZNF843Q8N446 348 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 AGBL5Q8NDL9 886 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 SLC37A2Q8TED4 501 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 AGAP3Q96P47 875 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 HERPUD2Q9BSE4 406 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 SARS2Q9NP81 518 aaKnown RBP17.95■□□□□ 0.46
RAB28-202ENST00000330852 PCDHGA3Q9Y5H0 932 aa17.95■□□□□ 0.46
RAB28-202ENST00000330852 ATMQ13315 3056 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 PRAMEF33A0A0G2JMD5 474 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 FADS2P1A8MWK0 482 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 MTSS1O43312 755 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 NUAK1O60285 661 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 PRAMEF10O60809 474 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 ATP1A1P05023 1023 aaKnown RBP17.94■□□□□ 0.46
RAB28-202ENST00000330852 ETV5P41161 510 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 CLCNKAP51800 687 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 MAPK10P53779 464 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 TAZQ16635 292 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.94■□□□□ 0.46
RAB28-202ENST00000330852 LYSMD3Q7Z3D4 306 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 TMC3Q7Z5M5 1100 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 OR10G6Q8NH81 332 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 RNF25Q96BH1 459 aaPredicted RBP17.94■□□□□ 0.46
RAB28-202ENST00000330852 CCDC74BQ96LY2 380 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 TAAR9Q96RI9 348 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 SLC38A3Q99624 504 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 TRIM39Q9HCM9 518 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 PDP2Q9P2J9 529 aa17.94■□□□□ 0.46
RAB28-202ENST00000330852 OAS3Q9Y6K5 1087 aaKnown RBP17.94■□□□□ 0.46
RAB28-202ENST00000330852 PSTPIP1O43586 416 aa17.93■□□□□ 0.46
RAB28-202ENST00000330852 SPOPO43791 374 aa17.93■□□□□ 0.46
RAB28-202ENST00000330852 TBX2Q13207 712 aaPredicted RBP17.93■□□□□ 0.46
RAB28-202ENST00000330852 GALNT3Q14435 633 aa17.93■□□□□ 0.46
RAB28-202ENST00000330852 ZNF569Q5MCW4 686 aa17.93■□□□□ 0.46
RAB28-202ENST00000330852 IYDQ6PHW0 289 aa17.93■□□□□ 0.46
RAB28-202ENST00000330852 CHST15Q7LFX5 561 aaPredicted RBP17.93■□□□□ 0.46
RAB28-202ENST00000330852 DTX1Q86Y01 620 aa17.93■□□□□ 0.46
RAB28-202ENST00000330852 AHCYL2Q96HN2 611 aaKnown RBP17.93■□□□□ 0.46
RAB28-202ENST00000330852 SPATA16Q9BXB7 569 aa17.93■□□□□ 0.46
RAB28-202ENST00000330852 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms