RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 CSH2P0DML3 217 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 COL6A1P12109 1028 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SIM2Q14190 667 aaPredicted RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 LIPMQ5VYY2 423 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 TMPRSS11AQ6ZMR5 421 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ZFP3Q96NJ6 502 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 CDADC1Q9BWV3 514 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 MID1O15344 667 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 PGLSO95336 258 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 STYK1Q6J9G0 422 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 KCNK18Q7Z418 384 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 OAFQ86UD1 273 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 LNX2Q8N448 690 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 TTC29Q8NA56 475 aaPredicted RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 CLCC1Q96S66 551 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 LMAN2LQ9H0V9 348 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 PPM1BO75688 479 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 GNAO1P09471 354 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SCNN1GP51170 649 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 CTBP1Q13363 440 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SEMA3AQ14563 771 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ZNF234Q14588 700 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ALG11Q2TAA5 492 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 SERPINA13PQ6UXR4 307 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ELOA2Q8IYF1 753 aaPredicted RBP7.88□□□□□ -1.15
CIITA-201ENST00000324288 PANX3Q96QZ0 392 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 PRRG4Q9BZD6 226 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 NFASCO94856 1347 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 ABCA6Q8N139 1617 aa7.88□□□□□ -1.15
CIITA-201ENST00000324288 CHADO15335 359 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 TUBG1P23258 451 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 DGKAP23743 735 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 S100GP29377 79 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 FNTBP49356 437 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 KHDC1Q4VXA5 237 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 PIWIL2Q8TC59 973 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 PMEPA1Q969W9 287 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 RTKNQ9BST9 563 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 EBPLQ9BY08 206 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 CXorf21Q9HAI6 301 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 IFT46Q9NQC8 304 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 XPR1Q9UBH6 696 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 FER1L5A0AVI2 2057 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 POU2F1P14859 743 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ALDH3A2P51648 485 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 SMIM11AP58511 58 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 AMPD2Q01433 879 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 GFOD2Q3B7J2 385 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 PRR23BQ6ZRT6 265 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 PRELID2Q8N945 189 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ZNF563Q8TA94 476 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 PPP3R2Q96LZ3 170 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 RRAGCQ9HB90 399 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ERVK-5Q9HDB9 667 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 COMMD3Q9UBI1 195 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 C3orf18Q9UK00 162 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 MED14O60244 1454 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 CYP1A1P04798 512 aaPredicted RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 ITPKAP23677 461 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 MNDAP41218 407 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 RGS19P49795 217 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 E2F2Q14209 437 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 PRAMEF19Q5SWL8 479 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 PRAMEF17Q5VTA0 474 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 FAM129CQ86XR2 697 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 KATNAL2Q8IYT4 538 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 GALNT15Q8N3T1 639 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 PCSK9Q8NBP7 692 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 OR2L3Q8NG85 312 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ZNF570Q96NI8 536 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 CDH19Q9H159 772 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 BRD9Q9H8M2 597 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 SUCOQ9UBS9 1254 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 OR12D3Q9UGF7 316 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 FER1L6Q2WGJ9 1857 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 TRBV23OR9-2A0A075B6M9 112 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 H3BSH0 61 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 FTH1P02794 183 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 CPSF6Q16630 551 aaKnown RBP eCLIP7.87□□□□□ -1.15
CIITA-201ENST00000324288 VPS26BQ4G0F5 336 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 ESRP1Q6NXG1 681 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 AKAP1Q92667 903 aaKnown RBP eCLIP7.87□□□□□ -1.15
CIITA-201ENST00000324288 CCDC120Q96HB5 630 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 MAGEE1Q9HCI5 957 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 CAMSAP1Q5T5Y3 1602 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 DDTLA6NHG4 134 aaPredicted RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 ADM5C9JUS6 153 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 TNFAIP8L3Q5GJ75 292 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 TUBGCP5Q96RT8 1024 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 CIB1Q99828 191 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 GPN3Q9UHW5 284 aaPredicted RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 FPGTO14772 594 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 TRBC1P01850 177 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 SCN1BQ07699 218 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 COMTD1Q86VU5 262 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 HELQQ8TDG4 1101 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 LINGO1Q96FE5 620 aa7.87□□□□□ -1.15
CIITA-201ENST00000324288 PURBQ96QR8 312 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 POLR1EQ9GZS1 481 aaKnown RBP7.87□□□□□ -1.15
CIITA-201ENST00000324288 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms