RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 ESRRGP62508 458 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 RHDQ02161 417 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 PPP1R3AQ16821 1122 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 EGFLAMQ63HQ2 1017 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 NADSYN1Q6IA69 706 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 LAYNQ6UX15 382 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 SLC15A4Q8N697 577 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 C2CD4AQ8NCU7 369 aaPredicted RBP15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 TRPC4APQ8TEL6 797 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 RMDN1Q96DB5 314 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 NSMCE4AQ9NXX6 385 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 CDYLQ9Y232 598 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 LRRC14BA6NHZ5 514 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 SAC3D1A6NKF1 404 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 TRIM64CA6NLI5 447 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 SLC2A3P11169 496 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 ZNF12P17014 697 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 ZNF182P17025 639 aaPredicted RBP15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 KCNC1P48547 511 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 GNA12Q03113 381 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 NSUN2Q08J23 767 aaKnown RBP eCLIP15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 SPIDRQ14159 915 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 ANKRD26P1Q6NSI1 321 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 FUT10Q6P4F1 479 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 TTC33Q6PID6 262 aaPredicted RBP15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 TRAF7Q6Q0C0 670 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 LRRC8DQ7L1W4 858 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 ARL10Q8N8L6 244 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 PPWD1Q96BP3 646 aaKnown RBP15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 CNOT6Q9ULM6 557 aaKnown RBP15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 FAM50BQ9Y247 325 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 FAM32AQ9Y421 112 aaKnown RBP15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 MYO16Q9Y6X6 1858 aa15.5■□□□□ 0.07
SHROOM1-201ENST00000319854 MYLKQ15746 1914 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 A0A087WXM4 84 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 C9JVG2 144 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 AP3B1O00203 1094 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 AKAP10O43572 662 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 SUPT7LO94864 414 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 CDH3P22223 829 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 RAB39AQ14964 217 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 HECTD2Q5U5R9 776 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 LINGO4Q6UY18 593 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 UMODL1-AS1Q8N2C9 162 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 NCKIPSDQ9NZQ3 722 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 TANC1Q9C0D5 1861 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 TMEM114B3SHH9 223 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 SULT1C4O75897 302 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 TMED10P49755 219 aaKnown RBP15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 EIF2B2P49770 351 aaKnown RBP15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 TNK2Q07912 1038 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 PRKAA1Q13131 559 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 FAM83EQ2M2I3 478 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 PITRM1Q5JRX3 1037 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 CHPT1Q8WUD6 406 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 PRDM5Q9NQX1 630 aaPredicted RBP15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 GIMAP2Q9UG22 337 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 ANKRD6Q9Y2G4 727 aa15.49■□□□□ 0.07
SHROOM1-201ENST00000319854 CBX4O00257 560 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 PPP6CO00743 305 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 ENPP3O14638 875 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 TPD52L2O43399 206 aaKnown RBP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 TCTN1Q2MV58 587 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 KIAA0930Q6ICG6 404 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 EFHBQ8N7U6 833 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 HMGCLL1Q8TB92 370 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 BCL7CQ8WUZ0 217 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 C8orf48Q96LL4 319 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 PTGDR2Q9Y5Y4 395 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 RANBP2P49792 3224 aaKnown RBP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 FAM149AA5PLN7 773 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 NCF1BA6NI72 391 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 ZNF839A8K0R7 811 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 NCF1CA8MVU1 366 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 SIX3O95343 332 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 INHAP05111 366 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 APOA4P06727 396 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 NCF1P14598 390 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 OR1D2P34982 312 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 MLLT10P55197 1068 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 TMEM207Q6UWW9 146 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 PAF1Q8N7H5 531 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 BPIFA1Q9NP55 256 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 IGSF5Q9NSI5 407 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 TMEM248Q9NWD8 314 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 MID2Q9UJV3 735 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 VWA7Q9Y334 891 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 ZFP37Q9Y6Q3 630 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 SLC6A4P31645 630 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 CA8P35219 290 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 GRIA3P42263 894 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 RGRP47804 291 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 ITGADQ13349 1161 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 RFTN1Q14699 578 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 AFMIDQ63HM1 303 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 CILP2Q8IUL8 1156 aa15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 ZC3H7AQ8IWR0 971 aaKnown RBP15.48■□□□□ 0.07
SHROOM1-201ENST00000319854 SLC7A5P1Q8MH63 180 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms