RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 OLFM1Q99784 485 aa19.34■□□□□ 0.69
ZNF554-201ENST00000317243 SPAG4Q9NPE6 437 aa19.34■□□□□ 0.69
ZNF554-201ENST00000317243 ATAD3AQ9NVI7 634 aa19.34■□□□□ 0.69
ZNF554-201ENST00000317243 VPS51Q9UID3 782 aa19.34■□□□□ 0.69
ZNF554-201ENST00000317243 TCAF1Q9Y4C2 921 aa19.34■□□□□ 0.69
ZNF554-201ENST00000317243 RNF103-CHMP3A0A140T963 221 aa19.33■□□□□ 0.69
ZNF554-201ENST00000317243 SCAMP3O14828 347 aaKnown RBP19.33■□□□□ 0.69
ZNF554-201ENST00000317243 PABPC1P11940 636 aaKnown RBP19.33■□□□□ 0.69
ZNF554-201ENST00000317243 CCNA2P20248 432 aa19.33■□□□□ 0.69
ZNF554-201ENST00000317243 ARSDP51689 593 aa19.33■□□□□ 0.69
ZNF554-201ENST00000317243 MFSD4BQ5TF39 518 aa19.33■□□□□ 0.69
ZNF554-201ENST00000317243 PGBD5Q8N414 524 aa19.33■□□□□ 0.69
ZNF554-201ENST00000317243 HEXDCQ8WVB3 486 aa19.33■□□□□ 0.69
ZNF554-201ENST00000317243 PHF21BQ96EK2 531 aa19.33■□□□□ 0.69
ZNF554-201ENST00000317243 MRPL46Q9H2W6 279 aaKnown RBP19.33■□□□□ 0.69
ZNF554-201ENST00000317243 SOX17Q9H6I2 414 aaPredicted RBP19.33■□□□□ 0.69
ZNF554-201ENST00000317243 CATSPERBQ9H7T0 1116 aa19.33■□□□□ 0.69
ZNF554-201ENST00000317243 RIC8BQ9NVN3 520 aa19.33■□□□□ 0.69
ZNF554-201ENST00000317243 DSEQ9UL01 958 aa19.33■□□□□ 0.69
ZNF554-201ENST00000317243 AAR2Q9Y312 384 aaKnown RBP19.33■□□□□ 0.69
ZNF554-201ENST00000317243 NOL3O60936 208 aaKnown RBP19.33■□□□□ 0.68
ZNF554-201ENST00000317243 BMP2P12643 396 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 HOXC13P31276 330 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 RCVRNP35243 200 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 ACVRL1P37023 503 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 CSRP3P50461 194 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 PRKAA2P54646 552 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 BRMS1LQ5PSV4 323 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 PERM1Q5SV97 790 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 DEPDC1Q5TB30 811 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 FAM171A1Q5VUB5 890 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 RANBP10Q6VN20 620 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 PCYOX1LQ8NBM8 494 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 GIPC2Q8TF65 315 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 HPS1Q92902 700 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 GPR78Q96P69 363 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 PALMDQ9NP74 551 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 PCDHB8Q9UN66 801 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 ST14Q9Y5Y6 855 aa19.33■□□□□ 0.68
ZNF554-201ENST00000317243 UNC80Q8N2C7 3258 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 MRASO14807 208 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 YWHAQP27348 245 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 HADHAP40939 763 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 SLC7A2P52569 658 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 FAM117BQ6P1L5 589 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 CCSER2Q9H7U1 834 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 UTP6Q9NYH9 597 aaKnown RBP19.32■□□□□ 0.68
ZNF554-201ENST00000317243 CLOCKO15516 846 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 BCL10O95999 233 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 PRSS56P0CW18 603 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 HSPA1AP0DMV8 641 aaKnown RBP19.32■□□□□ 0.68
ZNF554-201ENST00000317243 HSPA1BP0DMV9 641 aaKnown RBP19.32■□□□□ 0.68
ZNF554-201ENST00000317243 TTKP33981 857 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 TBX4P57082 545 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 DSC1Q08554 894 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 FBXL22Q6P050 247 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 TAS1R1Q7RTX1 841 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 CAMK1DQ8IU85 385 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 PELI3Q8N2H9 469 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 MAELQ96JY0 434 aaKnown RBP19.32■□□□□ 0.68
ZNF554-201ENST00000317243 SEPT5Q99719 369 aaPredicted RBP19.32■□□□□ 0.68
ZNF554-201ENST00000317243 FBRSL1Q9HCM7 1045 aaKnown RBP19.32■□□□□ 0.68
ZNF554-201ENST00000317243 ANKRD12Q6UB98 2062 aa19.32■□□□□ 0.68
ZNF554-201ENST00000317243 MUSKO15146 869 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 MMP2P08253 660 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 POLR2IP36954 125 aaKnown RBP19.31■□□□□ 0.68
ZNF554-201ENST00000317243 SLC12A2P55011 1212 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 PLCL1Q15111 1095 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 TCTN1Q2MV58 587 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 CTXN3Q4LDR2 81 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 ERMP1Q7Z2K6 904 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 LINC00523Q86TU6 105 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 PIM3Q86V86 326 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 DHFR2Q86XF0 187 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 SNX29P2Q8IUI4 249 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 ZNF683Q8IZ20 524 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 CADM3Q8N126 398 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 TMCO5AQ8N6Q1 288 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 PPHLN1Q8NEY8 458 aaKnown RBP19.31■□□□□ 0.68
ZNF554-201ENST00000317243 SLC30A1Q9Y6M5 507 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 A0A0U1RQS6 177 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 TRIM64A6NGJ6 449 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 NDUFB5O43674 189 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 ANXA9O76027 345 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 SOX11P35716 441 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 TAF10Q12962 218 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 KCNJ8Q15842 424 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 SLC36A3Q495N2 470 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 CLEC6AQ6EIG7 209 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 KDELC1Q6UW63 502 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 PIWIL4Q7Z3Z4 852 aaKnown RBP19.31■□□□□ 0.68
ZNF554-201ENST00000317243 MFSD2AQ8NA29 543 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 BPIFB6Q8NFQ5 453 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 TOP1MTQ969P6 601 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 RGS18Q9NS28 235 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 TREX1Q9NSU2 369 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 MARCH4Q9P2E8 410 aaPredicted RBP19.31■□□□□ 0.68
ZNF554-201ENST00000317243 GREB1Q4ZG55 1949 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 C9JVG2 144 aa19.31■□□□□ 0.68
ZNF554-201ENST00000317243 VNN2O95498 520 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms