RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 PAPOLBQ9NRJ5 636 aaKnown RBP13.43□□□□□ -0.26
RFFL-201ENST00000315249 SPATS2LQ9NUQ6 558 aaKnown RBP13.43□□□□□ -0.26
RFFL-201ENST00000315249 RHOP08100 348 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 PGDP52209 483 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 ZNF132P52740 706 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 MPP1Q00013 466 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 SLC13A2Q13183 592 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 SNX30Q5VWJ9 437 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 SLC22A17Q8WUG5 538 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 REEP1Q9H902 201 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 CAB39Q9Y376 341 aaPredicted RBP13.43□□□□□ -0.26
RFFL-201ENST00000315249 TCRBV9S1A1TA0A576 114 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 OR6B1O95007 311 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 CERS6Q6ZMG9 384 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 C10orf107Q8IVU9 208 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 DNAJC9Q8WXX5 260 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 IGSF21Q96ID5 467 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 ARHGAP9Q9BRR9 750 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 ACSS2Q9NR19 701 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 GDF3Q9NR23 364 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 POLR3BQ9NW08 1133 aaPredicted RBP13.43□□□□□ -0.26
RFFL-201ENST00000315249 MCM8Q9UJA3 840 aa13.43□□□□□ -0.26
RFFL-201ENST00000315249 RFXANKO14593 260 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 LAMTOR5O43504 91 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 HCRTO43612 131 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 PDE5AO76074 875 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 DCBLD1Q8N8Z6 715 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 OR52E6Q96RD3 313 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 EPB41L4BQ9H329 900 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 DZANK1Q9NVP4 752 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 COPS7AQ9UBW8 275 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 FKBPLQ9UIM3 349 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 UBR2Q8IWV8 1755 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 NEMP2A6NFY4 417 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 C2CD4BA6NLJ0 364 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 AXIN1O15169 862 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 CCINQ13939 588 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 OR52L1Q8NGH7 329 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 SLC9A6Q92581 669 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 LMAN2LQ9H0V9 348 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 SFXN1Q9H9B4 322 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 L2HGDHQ9H9P8 463 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 ANGPT4Q9Y264 503 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 POLR3HQ9Y535 204 aaPredicted RBP13.42□□□□□ -0.26
RFFL-201ENST00000315249 FAM20BO75063 409 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 MYL12AP19105 171 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 RNASEH2BQ5TBB1 312 aaKnown RBP13.42□□□□□ -0.26
RFFL-201ENST00000315249 ZNF776Q68DI1 518 aaPredicted RBP13.42□□□□□ -0.26
RFFL-201ENST00000315249 PEX1O43933 1283 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 RXRGP48443 463 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 BNC1Q01954 994 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 DSG1Q02413 1049 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 LY6G5CQ5SRR4 150 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 FAM171BQ6P995 826 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 ZNF549Q6P9A3 640 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 RNF168Q8IYW5 571 aaPredicted RBP13.42□□□□□ -0.26
RFFL-201ENST00000315249 RAD51AP1Q96B01 352 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 DNAJC11Q9NVH1 559 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 HEBP2Q9Y5Z4 205 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 CFAP20Q9Y6A4 193 aaKnown RBP13.42□□□□□ -0.26
RFFL-201ENST00000315249 AP2A1O95782 977 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 HSPA7P48741 367 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 ITPRIPL2Q3MIP1 535 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 SIAH1Q8IUQ4 282 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 RBM18Q96H35 190 aaKnown RBP13.42□□□□□ -0.26
RFFL-201ENST00000315249 SLC25A23Q9BV35 468 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 GRIP2Q9C0E4 1043 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 LZTS1Q9Y250 596 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 EDDM13A0A1B0GTR0 161 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 MLLT3P42568 568 aaPredicted RBP13.42□□□□□ -0.26
RFFL-201ENST00000315249 OC90Q02509 493 aaPredicted RBP13.42□□□□□ -0.26
RFFL-201ENST00000315249 C2orf80Q0P641 193 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 ZNF155Q12901 538 aaPredicted RBP13.42□□□□□ -0.26
RFFL-201ENST00000315249 QKIQ96PU8 341 aaKnown RBP eCLIP13.42□□□□□ -0.263e-7■■■□□ 18.5
RFFL-201ENST00000315249 FUT8Q9BYC5 575 aa13.42□□□□□ -0.26
RFFL-201ENST00000315249 LEFTY2O00292 366 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 AP3D1O14617 1153 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 ARHGEF9O43307 516 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 SNAP91O60641 907 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 UBOX5O94941 541 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 CA3P07451 260 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 CDKN2BP42772 138 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 KLC1Q07866 573 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 TRIM40Q6P9F5 258 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 GPR180Q86V85 440 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 DAW1Q8N136 415 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 SUN3Q8TAQ9 357 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 EXOSC8Q96B26 276 aaKnown RBP13.41□□□□□ -0.26
RFFL-201ENST00000315249 MYCBPQ99417 103 aaPredicted RBP13.41□□□□□ -0.26
RFFL-201ENST00000315249 MECRQ9BV79 373 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 RHOJQ9H4E5 214 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 MTMR11A4FU01 709 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 ACAP2Q15057 778 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 TCAIMQ8N3R3 496 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 ALG3Q92685 438 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 SCML2Q9UQR0 700 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 DUOX1Q9NRD9 1551 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 CRYBG1Q9Y4K1 1723 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 NAV1Q8NEY1 1877 aa13.41□□□□□ -0.26
RFFL-201ENST00000315249 ALPIP09923 528 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms