RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 SUDS3Q9H7L9 328 aaPredicted RBP14.48□□□□□ -0.09
PPP1CA-201ENST00000312989 PKD2L2Q9NZM6 624 aa14.48□□□□□ -0.09
PPP1CA-201ENST00000312989 KLHL8Q9P2G9 620 aaPredicted RBP14.48□□□□□ -0.09
PPP1CA-201ENST00000312989 MOSPD1Q9UJG1 213 aa14.48□□□□□ -0.09
PPP1CA-201ENST00000312989 DOLKQ9UPQ8 538 aa14.48□□□□□ -0.09
PPP1CA-201ENST00000312989 KNTC1P50748 2209 aa14.48□□□□□ -0.09
PPP1CA-201ENST00000312989 TCRBV7S2A1N4TA0A589 114 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 D6RAR5 112 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 GAPDHSO14556 408 aaPredicted RBP14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 NUDT21O43809 227 aaKnown RBP14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 USP12O75317 370 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 IPO7O95373 1038 aaKnown RBP14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 FTCDO95954 541 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 PYGLP06737 847 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ADRA1AP35348 466 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 OLIG2Q13516 323 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 SLC1A5Q15758 541 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 TBC1D25Q3MII6 688 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 SIRPB2Q5JXA9 342 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ZNF648Q5T619 568 aaPredicted RBP14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 RBM44Q6ZP01 1051 aaKnown RBP14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 MARK2Q7KZI7 788 aaKnown RBP14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 PID1Q7Z2X4 250 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ARL14Q8N4G2 192 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 TRAM1L1Q8N609 369 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ANP32EQ9BTT0 268 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ABCG4Q9H172 646 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 DPEP2Q9H4A9 486 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 R3HDM2Q9Y2K5 976 aaKnown RBP14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 PRKAB1Q9Y478 270 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ACACAQ13085 2346 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 B4GAT1O43505 415 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ECEL1O95672 775 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 RPLP0P05388 317 aaKnown RBP14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 RBP3P10745 1247 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 HMGCLP35914 325 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 EIF2S3P41091 472 aaKnown RBP14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 LSSP48449 732 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 GABREP78334 506 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ZFP36L1Q07352 338 aaKnown RBP14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 KIF5AQ12840 1032 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ILF3Q12906 894 aaKnown RBP eCLIP14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ALS2CLQ60I27 953 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 SLC30A9Q6PML9 568 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 KIAA1328Q86T90 577 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 OR6C4Q8NGE1 309 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 WDR48Q8TAF3 677 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ZDHHC1Q8WTX9 485 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 CRELD1Q96HD1 420 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 LRRN3Q9H3W5 708 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 POLR1BQ9H9Y6 1135 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ARFGAP3Q9NP61 516 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 IL17CQ9P0M4 197 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 LRIT1Q9P2V4 623 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 ATXN10Q9UBB4 475 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 TRHDEQ9UKU6 1024 aa14.47□□□□□ -0.09
PPP1CA-201ENST00000312989 MYLKQ15746 1914 aa14.46□□□□□ -0.09
PPP1CA-201ENST00000312989 RP1P56715 2156 aa14.46□□□□□ -0.09
PPP1CA-201ENST00000312989 SCN8AQ9UQD0 1980 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 CHUKO15111 745 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 PPM1DO15297 605 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 GPR39O43194 453 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 NUAK1O60285 661 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 ZNF8P17098 575 aaPredicted RBP14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 ACTR1BP42025 376 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 NAP1L1P55209 391 aaKnown RBP14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 EIF3EP60228 445 aaKnown RBP14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 ACTR1AP61163 376 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 MPP3Q13368 585 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 ANKRD20A2Q5SQ80 823 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 ANKRD20A1Q5TYW2 823 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 ANKRD20A3Q5VUR7 823 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 RANBP10Q6VN20 620 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 ADGRG6Q86SQ4 1221 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 CCNJLQ8IV13 435 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 ZNF547Q8IVP9 402 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 SLITRK4Q8IW52 837 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 SLC35B2Q8TB61 432 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 CCHCR1Q8TD31 782 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 DTX3LQ8TDB6 740 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 GRAMD1AQ96CP6 724 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 PLEKHG4BQ96PX9 1271 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 CDH19Q9H159 772 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 IL26Q9NPH9 171 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 RSPH14Q9UHP6 348 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 AMFRQ9UKV5 643 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 ATXN7L1Q9ULK2 861 aaPredicted RBP14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 SATB2Q9UPW6 733 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 PCDHGA8Q9Y5G5 932 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 AK5Q9Y6K8 562 aa14.46□□□□□ -0.1
PPP1CA-201ENST00000312989 MIF4GDA9UHW6 222 aaKnown RBP14.45□□□□□ -0.1
PPP1CA-201ENST00000312989 H7C0C1 242 aa14.45□□□□□ -0.1
PPP1CA-201ENST00000312989 SLC4A1P02730 911 aa14.45□□□□□ -0.1
PPP1CA-201ENST00000312989 HLA-DPA1P20036 260 aa14.45□□□□□ -0.1
PPP1CA-201ENST00000312989 PSMB4P28070 264 aa14.45□□□□□ -0.1
PPP1CA-201ENST00000312989 CCKBRP32239 447 aa14.45□□□□□ -0.1
PPP1CA-201ENST00000312989 ATP5OP48047 213 aa14.45□□□□□ -0.1
PPP1CA-201ENST00000312989 GDF10P55107 478 aa14.45□□□□□ -0.1
PPP1CA-201ENST00000312989 CFHR1Q03591 330 aa14.45□□□□□ -0.1
PPP1CA-201ENST00000312989 LRP8Q14114 963 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms