RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SCUBE1Q8IWY4 988 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 NXPE3Q969Y0 559 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 HIST1H2AAQ96QV6 131 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ZNF607Q96SK3 696 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ACE2Q9BYF1 805 aaPredicted RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 RABGEF1Q9UJ41 708 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ILVBLA1L0T0 632 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 WRBO00258 174 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SERPINA1P01009 418 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 CCNYL3P0C7X3 344 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 IDSP22304 550 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 PRKAG1P54619 331 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 CDK18Q07002 472 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 DMPKQ09013 629 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 CCDC80Q76M96 950 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 DAW1Q8N136 415 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 CRYBG2Q8N1P7 616 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SH2D3CQ8N5H7 860 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 KYQ8NBH2 561 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC4A11Q8NBS3 891 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ZHX1-C8orf76Q96EF9 292 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ZBED3Q96IU2 234 aaPredicted RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 HGH1Q9BTY7 390 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 BRINP2Q9C0B6 783 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SMURF2Q9HAU4 748 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 TMEM138Q9NPI0 162 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC35C2Q9NQQ7 365 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 CLN6Q9NWW5 311 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 RALGAPA1Q6GYQ0 2036 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 WDR81Q562E7 1941 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 DLEC1Q9Y238 1755 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 A0A1W2PQH9 124 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 DDX3XO00571 662 aaKnown RBP eCLIP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 NRP1O14786 923 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 TGFB1I1O43294 461 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ZNF208O43345 1280 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 NR2F1P10589 423 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 CALB2P22676 271 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 FAUP35544 74 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 DGKGP49619 791 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ARF5P84085 180 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 GSTM4Q03013 218 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 GPR17Q13304 367 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 HNRNPDQ14103 355 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC29A2Q14542 456 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 CCL14Q16627 93 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 KBTBD6Q86V97 674 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SEC16BQ96JE7 1060 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 QKIQ96PU8 341 aaKnown RBP eCLIP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 IL12RB2Q99665 862 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 KLHL4Q9C0H6 718 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC25A51Q9H1U9 297 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 EXD2Q9NVH0 621 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 HSFX1Q9UBD0 423 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 PGAP2Q9UHJ9 254 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 PHTF1Q9UMS5 762 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 IRGMA1A4Y4 181 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 PRR5-ARHGAP8B1AHC4 643 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 B4GALT5O43286 388 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 KHDRBS3O75525 346 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 RNASEH2AO75792 299 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 GATBO75879 557 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 LCA5LO95447 670 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ABHD2P08910 425 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 VARSP26640 1264 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ITPKBP27987 946 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 EIF4HQ15056 248 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 PARGQ86W56 976 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 IQCF2Q8IXL9 164 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 PCDH20Q8N6Y1 951 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 NIPA2Q8N8Q9 360 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 ADAM32Q8TC27 787 aa8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 MRPL57Q9BQC6 102 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 SNRNP25Q9BV90 132 aaKnown RBP8.3□□□□□ -1.08
PCDHB1-201ENST00000306549 TLX3O43711 291 aaPredicted RBP8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 ERCC2P18074 760 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 TACR2P21452 398 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 TNFSF9P41273 254 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 MRPS22P82650 360 aaKnown RBP8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 ST3GAL1Q11201 340 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 TEX44Q53QW1 395 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 SAMD4BQ5PRF9 694 aaKnown RBP8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 NPLOC4Q8TAT6 608 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 MAGEE2Q8TD90 523 aaPredicted RBP8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 MAGEB18Q96M61 343 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 FERD3LQ96RJ6 166 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 HEPHQ9BQS7 1158 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 LRRC19Q9H756 370 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 TXNRD2Q9NNW7 524 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 KCND1Q9NSA2 647 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 CROTQ9UKG9 612 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 SORCS3Q9UPU3 1222 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 E9PAM4 449 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 XKRYO14609 159 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 FKBP6O75344 327 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 PGM3O95394 542 aa8.29□□□□□ -1.08
PCDHB1-201ENST00000306549 CRATP43155 626 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms