RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 FBXO44Q9H4M3 255 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 PCDHB7Q9Y5E2 793 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 ZCWPW2A0A1B0GU75 182 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 TCRBV5S1A1TA0A578 114 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 ELNP15502 786 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 IL7RP16871 459 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 ZNF182P17025 639 aaPredicted RBP13.24□□□□□ -0.29
CASC4-201ENST00000299957 ITPKAP23677 461 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 PLA2G4EQ3MJ16 856 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 ZCCHC8Q6NZY4 707 aaKnown RBP13.24□□□□□ -0.29
CASC4-201ENST00000299957 OR8H2Q8N162 312 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 OR2T12Q8NG77 320 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 NPLOC4Q8TAT6 608 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 ANKRD49Q8WVL7 239 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 CCDC28BQ9BUN5 200 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 TLE6Q9H808 572 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 PTTG2Q9NZH5 202 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 KCNQ1P51787 676 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 POLR2JP52435 117 aaKnown RBP13.24□□□□□ -0.29
CASC4-201ENST00000299957 PRKCQQ04759 706 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 CRY1Q16526 586 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 C2orf73Q8N5S3 287 aaPredicted RBP13.24□□□□□ -0.29
CASC4-201ENST00000299957 OR52J3Q8NH60 311 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 RAET1EQ8TD07 263 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 REXO4Q9GZR2 422 aaKnown RBP13.24□□□□□ -0.29
CASC4-201ENST00000299957 PALMDQ9NP74 551 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 CROCCQ5TZA2 2017 aa13.24□□□□□ -0.29
CASC4-201ENST00000299957 ZBTB42B2RXF5 422 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 NADKO95544 446 aaPredicted RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 UGT1A1P22309 533 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 UGT1A4P22310 534 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 UGT1A3P35503 534 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 UGT1A5P35504 534 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 HNF4AP41235 474 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 NIPAL4Q0D2K0 466 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 SPDYE7PQ495Y7 208 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 ATXN7L2Q5T6C5 722 aaPredicted RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 TIFABQ6ZNK6 161 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 ZNF540Q8NDQ6 660 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 OR7A2PQ8NGA2 310 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 STYXQ8WUJ0 223 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 AURKBQ96GD4 344 aaPredicted RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 APOLD1Q96LR9 279 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 A0A0G2JLL6 359 aaPredicted RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 B4GAT1O43505 415 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 RECQL5O94762 991 aaPredicted RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 GNAO1P09471 354 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 CCNCP24863 283 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 XIAPP98170 497 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 KRT33BQ14525 404 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 INTS6LQ5JSJ4 861 aaKnown RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 PRRT2Q7Z6L0 340 aaPredicted RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 ZBED2Q9BTP6 218 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 CIPCQ9C0C6 399 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 TPK1Q9H3S4 243 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 CAPN10Q9HC96 672 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 MRGBPQ9NV56 204 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 MIOSQ9NXC5 875 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 SMPD3Q9NY59 655 aaPredicted RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 TRPM5Q9NZQ8 1165 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 SH3BP1Q9Y3L3 701 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 SMIM35A0A1B0GVV1 85 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 BOLA2-SMG1P6H3BVE0 249 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 hCG_2039718K7EN88 272 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 ZNF197O14709 1029 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 RAD51BO15315 384 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 ZNF189O75820 626 aaPredicted RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 MFN2O95140 757 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 SNAI1O95863 264 aaPredicted RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 FADS2O95864 444 aaKnown RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 APOA1P02647 267 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 ALDH9A1P49189 494 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 FAM174BQ3ZCQ3 159 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 EFL1Q7Z2Z2 1120 aaKnown RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 ASB9Q96DX5 294 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 PPP1R2P1Q96PQ5 205 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 EPB41L1Q9H4G0 881 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 IPPKQ9H8X2 491 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 PLGRKTQ9HBL7 147 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 UBAP1Q9NZ09 502 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 AGO1Q9UL18 857 aaKnown RBP13.23□□□□□ -0.29
CASC4-201ENST00000299957 PTCH2Q9Y6C5 1203 aa13.23□□□□□ -0.29
CASC4-201ENST00000299957 IGKV6D-21A0A0A0MT36 114 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 IRAK2O43187 625 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 GPR39O43194 453 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 GJB3O75712 270 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 COL6A1P12109 1028 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 AKR1A1P14550 325 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 IDO1P14902 403 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 MERTKQ12866 999 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 ST13P5Q8NFI4 369 aaPredicted RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 ACAT2Q9BWD1 397 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 SLC25A51Q9H1U9 297 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 RAD21L1Q9H4I0 556 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 SMURF2Q9HAU4 748 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 EIF2B3Q9NR50 452 aaKnown RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 TRMT13Q9NUP7 481 aaKnown RBP13.22□□□□□ -0.29
CASC4-201ENST00000299957 PCDHGB5Q9Y5G0 923 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 EVPLQ92817 2033 aa13.22□□□□□ -0.29
CASC4-201ENST00000299957 ARPC2O15144 300 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms