RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 NTRK1P04629 796 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 MTHFD1P11586 935 aaKnown RBP13.39□□□□□ -0.27
HPS3-201ENST00000296051 CENPAP49450 140 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 MAP3K10Q02779 954 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 CRTC3Q6UUV7 619 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 KCTD8Q6ZWB6 473 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 GALNT5Q7Z7M9 940 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 FBXL18Q96ME1 805 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 GPATCH1Q9BRR8 931 aaKnown RBP13.39□□□□□ -0.27
HPS3-201ENST00000296051 NIFKQ9BYG3 293 aaKnown RBP13.39□□□□□ -0.27
HPS3-201ENST00000296051 ARHGAP39Q9C0H5 1083 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 POLG2Q9UHN1 485 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 PLIN4Q96Q06 1357 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 RGPD1P0DJD0 1748 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 EI24O14681 340 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 AZIN1O14977 448 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 CCNG1P51959 295 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 WNT7BP56706 349 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 LILRA4P59901 499 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 TRAF3Q13114 568 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 SH3D19Q5HYK7 790 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 TTC23Q5W5X9 447 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 REP15Q6BDI9 236 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 PAGE2Q7Z2X7 111 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 TMEM130Q8N3G9 435 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 UBASH3BQ8TF42 649 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 OR8D1Q8WZ84 308 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 TRIM8Q9BZR9 551 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 RASSF1Q9NS23 344 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 ZDHHC2Q9UIJ5 367 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 H3BMM5 538 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 PER2O15055 1255 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 C1RP00736 705 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 UGT1A6P19224 532 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 CORO1AP31146 461 aaKnown RBP13.39□□□□□ -0.27
HPS3-201ENST00000296051 STT3AP46977 705 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 TGM3Q08188 693 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 GDF6Q6KF10 455 aaPredicted RBP13.39□□□□□ -0.27
HPS3-201ENST00000296051 CPA6Q8N4T0 437 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 PEBP4Q96S96 227 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 DNAJB4Q9UDY4 337 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 VWA7Q9Y334 891 aa13.39□□□□□ -0.27
HPS3-201ENST00000296051 FGF10O15520 208 aaPredicted RBP13.38□□□□□ -0.27
HPS3-201ENST00000296051 B4GALT4O60513 344 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 ADRA1BP35368 520 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 MRPL28Q13084 256 aaKnown RBP13.38□□□□□ -0.27
HPS3-201ENST00000296051 C2orf27AQ580R0 203 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 CLYBLQ8N0X4 340 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 CLIP3Q96DZ5 547 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 GMLQ99445 158 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 PRKD2Q9BZL6 878 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 TELO2Q9Y4R8 837 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 TRIM43BA6NCK2 446 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 RAD51BO15315 384 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 TYMPP19971 482 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 CYP2A7P20853 494 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 TNK2Q07912 1038 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 SMARCB1Q12824 385 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 OR52E8Q6IFG1 317 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 CAND1Q86VP6 1230 aaKnown RBP13.38□□□□□ -0.27
HPS3-201ENST00000296051 ZNF540Q8NDQ6 660 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 ZFP28Q8NHY6 868 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 SIGLEC10Q96LC7 697 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
HPS3-201ENST00000296051 MIEF1Q9NQG6 463 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 USE1Q9NZ43 259 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 SIRPGQ9P1W8 387 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 KLQ9UEF7 1012 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 TRBV23OR9-2A0A075B6M9 112 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 GCATO75600 419 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 EOMESO95936 686 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 UGT1A1P22309 533 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 UGT1A4P22310 534 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 UGT1A3P35503 534 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 UGT1A5P35504 534 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 CHRNA4P43681 627 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 ASPAP45381 313 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 ARHGAP1Q07960 439 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 CSTF3Q12996 717 aaKnown RBP13.38□□□□□ -0.27
HPS3-201ENST00000296051 MYLK3Q32MK0 819 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 TEX44Q53QW1 395 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 OR14C36Q8NHC7 312 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 HEXDCQ8WVB3 486 aa13.38□□□□□ -0.27
HPS3-201ENST00000296051 A0A087X1B8 175 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 MYBPHLA2RUH7 354 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 HCRTO43612 131 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 ZBTB14O43829 449 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 IPO13O94829 963 aaKnown RBP13.37□□□□□ -0.27
HPS3-201ENST00000296051 KRT20P35900 424 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 HNF4AP41235 474 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 SEC13P55735 322 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 WNT3AP56704 352 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 CCNIQ14094 377 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 CLHC1Q8NHS4 586 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 QKIQ96PU8 341 aaKnown RBP eCLIP13.37□□□□□ -0.27
HPS3-201ENST00000296051 VAT1Q99536 393 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 UGT2B28Q9BY64 529 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 SH3BP4Q9P0V3 963 aa13.37□□□□□ -0.27
HPS3-201ENST00000296051 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms