RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 MAPK9P45984 424 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 TSPAN5P62079 268 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 BNIP3Q12983 259 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 SGCGQ13326 291 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 BATFQ16520 125 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 KCTD19Q17RG1 926 aaPredicted RBP9.06□□□□□ -0.96
SMC2-201ENST00000286398 VPS26BQ4G0F5 336 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 RTL4Q6ZR62 310 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 USP30Q70CQ3 517 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 CEP76Q8TAP6 659 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 PPP1R13LQ8WUF5 828 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 PPCDCQ96CD2 204 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 C12orf66Q96MD2 445 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 NXF3Q9H4D5 531 aaKnown RBP9.06□□□□□ -0.96
SMC2-201ENST00000286398 POMPQ9Y244 141 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 LAMC1P11047 1609 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 TRIM64A6NGJ6 449 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 TRIM64BA6NI03 449 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 COL6A1P12109 1028 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 SERPINA4P29622 427 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 SSTP61278 116 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 STXBP1P61764 594 aaKnown RBP9.06□□□□□ -0.96
SMC2-201ENST00000286398 NADK2Q4G0N4 442 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 CRTC2Q53ET0 693 aaPredicted RBP9.06□□□□□ -0.96
SMC2-201ENST00000286398 TOR1AIP1Q5JTV8 583 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 TMEM214Q6NUQ4 689 aaKnown RBP9.06□□□□□ -0.96
SMC2-201ENST00000286398 CRTC1Q6UUV9 634 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 LRRC70Q7Z2Q7 622 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 GPALPP1Q8IXQ4 340 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 TMIEQ8NEW7 156 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 DNAJA4Q8WW22 397 aaPredicted RBP9.06□□□□□ -0.96
SMC2-201ENST00000286398 RNF31Q96EP0 1072 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 HSPBAP1Q96EW2 488 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 LPIN3Q9BQK8 851 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 KCNN2Q9H2S1 579 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 CNOT6Q9ULM6 557 aaKnown RBP9.06□□□□□ -0.96
SMC2-201ENST00000286398 PCDHB5Q9Y5E4 795 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 SNCAIPQ9Y6H5 919 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 AK9Q5TCS8 1911 aa9.06□□□□□ -0.96
SMC2-201ENST00000286398 ERN1O75460 977 aaKnown RBP9.05□□□□□ -0.96
SMC2-201ENST00000286398 TRUB2O95900 331 aaKnown RBP9.05□□□□□ -0.96
SMC2-201ENST00000286398 ICAM3P32942 547 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 SLC26A2P50443 739 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 POLR2JP52435 117 aaKnown RBP9.05□□□□□ -0.96
SMC2-201ENST00000286398 ACSBG2Q5FVE4 666 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 ZPBP2Q6X784 338 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 SMG8Q8ND04 991 aaKnown RBP9.05□□□□□ -0.96
SMC2-201ENST00000286398 MSANTD3Q96H12 275 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 MRPL45Q9BRJ2 306 aaKnown RBP9.05□□□□□ -0.96
SMC2-201ENST00000286398 AGXT2Q9BYV1 514 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 POLR3BQ9NW08 1133 aaPredicted RBP9.05□□□□□ -0.96
SMC2-201ENST00000286398 USP20Q9Y2K6 914 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMC2-201ENST00000286398 AXIN2Q9Y2T1 843 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 MFHAS1Q9Y4C4 1052 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 KCNE2Q9Y6J6 123 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 BTBD19C9JJ37 291 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 J3QRK9 145 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 FGF10O15520 208 aaPredicted RBP9.05□□□□□ -0.96
SMC2-201ENST00000286398 SCN2BO60939 215 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 RPL35P42766 123 aaKnown RBP9.05□□□□□ -0.96
SMC2-201ENST00000286398 KIR3DL1P43629 444 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 EPHB3P54753 998 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 USP45Q70EL2 814 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 GALNT12Q8IXK2 581 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 HDDC3Q8N4P3 179 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 MAB21L3Q8N8X9 362 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 OR4A15Q8NGL6 344 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 STOML3Q8TAV4 291 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 ACER1Q8TDN7 264 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 FCGR1BQ92637 280 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 KAT2AQ92830 837 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 FBXL8Q96CD0 374 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 ALG2Q9H553 416 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 TBC1D17Q9HA65 648 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 SPON1Q9HCB6 807 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 PAK6Q9NQU5 681 aaPredicted RBP9.05□□□□□ -0.96
SMC2-201ENST00000286398 DNAJC28Q9NX36 388 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 TAS2R1Q9NYW7 299 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 SEC14L3Q9UDX4 400 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 BIVM-ERCC5R4GMW8 1640 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 MCIDASD6RGH6 385 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 SLC22A1O15245 554 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 OR10H2O60403 315 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 CALCAP01258 141 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 FABP3P05413 133 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 USP17L7P0C7H9 530 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 ALG11Q2TAA5 492 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 VWA5B1Q5TIE3 1220 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 DUS1LQ6P1R4 473 aaKnown RBP9.05□□□□□ -0.96
SMC2-201ENST00000286398 ZNF730Q6ZMV8 503 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 ANKRD23Q86SG2 305 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 AGO4Q9HCK5 861 aaKnown RBP9.05□□□□□ -0.96
SMC2-201ENST00000286398 FRMPD4Q14CM0 1322 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 TNS3Q68CZ2 1445 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 CPSF4LA6NMK7 179 aaKnown RBP9.05□□□□□ -0.96
SMC2-201ENST00000286398 M0QX08 132 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 MPZL2O60487 215 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 TULP3O75386 442 aa9.05□□□□□ -0.96
SMC2-201ENST00000286398 MTA2O94776 668 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms