RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 UBE2Q2LH0YL09 131 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 CCNB2O95067 398 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 GJB6O95452 261 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 YES1P07947 543 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 GMPSP49915 693 aaPredicted RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 RORCP51449 518 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 LARS2Q15031 903 aaKnown RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 HERC3Q15034 1050 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 REP15Q6BDI9 236 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 ZCCHC12Q6PEW1 402 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 PAMR1Q6UXH9 720 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 AHSA2Q719I0 299 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 TMEM192Q8IY95 271 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 SNX33Q8WV41 574 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 AP2M1Q96CW1 435 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 CDADC1Q9BWV3 514 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 PRDM12Q9H4Q4 367 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 TAS2R14Q9NYV8 317 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 NUDT4Q9NZJ9 180 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 PTCH2Q9Y6C5 1203 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 C1QTNF3-AMACRE9PGA6 284 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 CSDE1O75534 798 aaKnown RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 ASLP04424 464 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 MANFP55145 182 aaKnown RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 CRADDP78560 199 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 DLG1Q12959 904 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 ZYG11AQ6WRX3 759 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 PACRGLQ8N7B6 248 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 PIGXQ8TBF5 258 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 MKL1Q969V6 931 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 SEC14L3Q9UDX4 400 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 TIMM13Q9Y5L4 95 aaPredicted RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 KIF1BO60333 1816 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 MAGP20916 626 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 THOP1P52888 689 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC5A3P53794 718 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 GTF2BQ00403 316 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 FMO1Q01740 532 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 C15orf59Q2T9L4 293 aaPredicted RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC39A12Q504Y0 691 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 CXorf57Q6NSI4 855 aaKnown RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 LRRC55Q6ZSA7 311 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF433Q8N7K0 673 aaPredicted RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 ADAMTS15Q8TE58 950 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC4A9Q96Q91 983 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 CCDC177Q9NQR7 707 aaPredicted RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 ANKRD63C9JTQ0 380 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 M0QX08 132 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 XKRYO14609 159 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 SCN2BO60939 215 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 ERAL1O75616 437 aaKnown RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 PRH1P02810 166 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 MPSTP25325 297 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 DCDC1P59894 354 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 NOMO3P69849 1222 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 PFKPQ01813 784 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 PRKD1Q15139 912 aaPredicted RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 CPSF6Q16630 551 aaKnown RBP eCLIP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 CAPN13Q6MZZ7 669 aaPredicted RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 ERI1Q8IV48 349 aaKnown RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 TTC29Q8NA56 475 aaPredicted RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 COPS8Q99627 209 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 TNKS2Q9H2K2 1166 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 EIF3KQ9UBQ5 218 aaKnown RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF639Q9UID6 485 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 SMCO3A2RU48 225 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 PPEF2O14830 753 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 ABL2P42684 1182 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 USP4Q13107 963 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 GRM3Q14832 879 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 LDLRAP1Q5SW96 308 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 FAM171A1Q5VUB5 890 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 CCSAPQ6IQ19 270 aaPredicted RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 SNX20Q7Z614 316 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 TRIM74Q86UV6 250 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 TRIM73Q86UV7 250 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 TNS4Q8IZW8 715 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 HJURPQ8NCD3 748 aaPredicted RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 AKAP1Q92667 903 aaKnown RBP eCLIP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 DNAJC11Q9NVH1 559 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 GPN3Q9UHW5 284 aaPredicted RBP8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 DNMT3LQ9UJW3 386 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 TNFSF13BQ9Y275 285 aa8.67□□□□□ -1.02
SCUBE3-201ENST00000274938 AXIN1O15169 862 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 KERAO60938 352 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 CDH8P55286 799 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 RTP1P59025 263 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 PPP3R1P63098 170 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 PPP3CAQ08209 521 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 LAPTM5Q13571 262 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ADGRE1Q14246 886 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 RNASE12Q5GAN4 147 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 C11orf65Q8NCR3 313 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 ZNF548Q8NEK5 533 aaPredicted RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 SEMA3CQ99985 751 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 NUSAP1Q9BXS6 441 aaKnown RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 COMMD4Q9H0A8 199 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 DENND2DQ9H6A0 471 aaPredicted RBP8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 IFT46Q9NQC8 304 aa8.66□□□□□ -1.02
SCUBE3-201ENST00000274938 TRPV2Q9Y5S1 764 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms