RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PPM1JQ5JR12 505 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 SAMD4BQ5PRF9 694 aaKnown RBP9.18□□□□□ -0.94
PDGFC-201ENST00000274071 TPRG1LQ5T0D9 272 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 SEL1L3Q68CR1 1132 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 LAMTOR1Q6IAA8 161 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 LRRTM3Q86VH5 581 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 RIT1Q92963 219 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 ELMO3Q96BJ8 720 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 UBXN10Q96LJ8 280 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 KLHL15Q96M94 604 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 LXNQ9BS40 222 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 STRA6Q9BX79 667 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 OR51B5Q9H339 312 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 LTB4R2Q9NPC1 389 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 ACSS2Q9NR19 701 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 MAP3K20Q9NYL2 800 aaKnown RBP9.18□□□□□ -0.94
PDGFC-201ENST00000274071 GPRC5BQ9NZH0 403 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 PRKAG2Q9UGJ0 569 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 TBC1D24Q9ULP9 559 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 CSNK1G3Q9Y6M4 447 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 CCDC78A2IDD5 438 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 LRRC37AA6NMS7 1700 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 H0Y626 953 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 EIF3DO15371 548 aaKnown RBP eCLIP9.18□□□□□ -0.94
PDGFC-201ENST00000274071 MAFO75444 373 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-201ENST00000274071 SLC22A5O76082 557 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 SNX4O95219 450 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 AGXTP21549 392 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 MPSTP25325 297 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 IL1R2P27930 398 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 SEMA3BQ13214 749 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 LTBP1Q14766 1721 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 MTERF2Q49AM1 385 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 GLRA4Q5JXX5 417 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 C1orf220Q5T0J3 134 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 LAYNQ6UX15 382 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 C16orf86Q6ZW13 317 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 C16orf62Q7Z3J2 963 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 CHDHQ8NE62 594 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-201ENST00000274071 ST8SIA4Q92187 359 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 COA7Q96BR5 231 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 SH2D3AQ9BRG2 576 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 ILKAPQ9H0C8 392 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-201ENST00000274071 TMEM168Q9H0V1 697 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 TNKS2Q9H2K2 1166 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 SAV1Q9H4B6 383 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-201ENST00000274071 CD93Q9NPY3 652 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 TRMT13Q9NUP7 481 aaKnown RBP9.18□□□□□ -0.94
PDGFC-201ENST00000274071 COL20A1Q9P218 1284 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 DAGLAQ9Y4D2 1042 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 HRH3Q9Y5N1 445 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 METTL15A6NJ78 407 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 FAM159BA6NKW6 160 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 LINC00587B1AMM8 73 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 G3V3G9 751 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 TFECO14948 347 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-201ENST00000274071 GRID2O43424 1007 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 TFEBP19484 476 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 PSMA4P25789 261 aaKnown RBP9.18□□□□□ -0.94
PDGFC-201ENST00000274071 RFX2P48378 723 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 SERPINB9P50453 376 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 TPMTP51580 245 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 PRKCDQ05655 676 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 OTUD3Q5T2D3 398 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-201ENST00000274071 DCAF8Q5TAQ9 597 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 KRT39Q6A163 491 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 LAIR2Q6ISS4 152 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 RETSATQ6NUM9 610 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 GPAT4Q86UL3 456 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 MYCT1Q8N699 235 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 YIPF7Q8N8F6 280 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 TRPV3Q8NET8 790 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 OR10T2Q8NGX3 314 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 KLHL6Q8WZ60 621 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 RORBQ92753 470 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 MASTLQ96GX5 879 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 TNIP3Q96KP6 325 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 MYRFLQ96LU7 910 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 SDHCQ99643 169 aaPredicted RBP9.18□□□□□ -0.94
PDGFC-201ENST00000274071 TMEM47Q9BQJ4 181 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 CYP3A43Q9HB55 503 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 TINAGQ9UJW2 476 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 STOML2Q9UJZ1 356 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 NAALAD2Q9Y3Q0 740 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 MFHAS1Q9Y4C4 1052 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 HSPB11Q9Y547 144 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 GMPPBQ9Y5P6 360 aa9.18□□□□□ -0.94
PDGFC-201ENST00000274071 UTRNP46939 3433 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 AQP12BA6NM10 295 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 NR3C2P08235 984 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 KRT19P08727 400 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 SPATA31C1P0DKV0 1188 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 MTHFD1P11586 935 aaKnown RBP9.17□□□□□ -0.94
PDGFC-201ENST00000274071 SLC15A1P46059 708 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 CPT1AP50416 773 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 VAMP7P51809 220 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 MAP2K6P52564 334 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 SLC7A2P52569 658 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 GABARAPL2P60520 117 aa9.17□□□□□ -0.94
PDGFC-201ENST00000274071 CSTF3Q12996 717 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms