RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 POLMQ9NP87 494 aaPredicted RBP13.66□□□□□ -0.22
NPC1-201ENST00000269228 KLHL3Q9UH77 587 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 MAPRE3Q9UPY8 281 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 SNUPNO95149 360 aaKnown RBP13.66□□□□□ -0.22
NPC1-201ENST00000269228 GTF2E2P29084 291 aaKnown RBP13.66□□□□□ -0.22
NPC1-201ENST00000269228 HOXA11P31270 313 aaPredicted RBP13.66□□□□□ -0.22
NPC1-201ENST00000269228 GUCA1AP43080 201 aaPredicted RBP13.66□□□□□ -0.22
NPC1-201ENST00000269228 GSSP48637 474 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 RPIAP49247 311 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 KLHL35Q6PF15 583 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 TMEM220Q6QAJ8 160 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 CHST15Q7LFX5 561 aaPredicted RBP13.66□□□□□ -0.22
NPC1-201ENST00000269228 GPR180Q86V85 440 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 SUV39H2Q9H5I1 410 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 SGK2Q9HBY8 427 aa13.66□□□□□ -0.22
NPC1-201ENST00000269228 M0R3G1 203 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 SLC7A4O43246 635 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 ILF3Q12906 894 aaKnown RBP eCLIP13.65□□□□□ -0.22
NPC1-201ENST00000269228 ARSIQ5FYB1 569 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 WASHC2DQ5SRD0 308 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 TAF8Q7Z7C8 310 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 OR6Y1Q8NGX8 325 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 TMEM216Q9P0N5 145 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 MEIS3P2A8K0S8 358 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 EDF1O60869 148 aaKnown RBP13.65□□□□□ -0.22
NPC1-201ENST00000269228 DRD4P21917 467 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 DDX6P26196 483 aaKnown RBP eCLIP13.65□□□□□ -0.229e-6■□□□□ 10.1
NPC1-201ENST00000269228 GRIA1P42261 906 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 SLC25A11Q02978 314 aaKnown RBP13.65□□□□□ -0.22
NPC1-201ENST00000269228 RUNX1T1Q06455 604 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 EID3Q8N140 333 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 OR13C4Q8NGS5 318 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 BPIFB1Q8TDL5 484 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 DDX1Q92499 740 aaKnown RBP13.65□□□□□ -0.22
NPC1-201ENST00000269228 WDR55Q9H6Y2 383 aaPredicted RBP13.65□□□□□ -0.22
NPC1-201ENST00000269228 GEMIN8Q9NWZ8 242 aaKnown RBP13.65□□□□□ -0.22
NPC1-201ENST00000269228 ITGB4P16144 1822 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 GNA13Q14344 377 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 ZNF460Q14592 562 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 ALFQ53S48 1182 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 MFSD5Q6N075 450 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 ALYREFQ86V81 257 aaKnown RBP13.65□□□□□ -0.22
NPC1-201ENST00000269228 KRT73Q86Y46 540 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 GTF2A1LQ9UNN4 478 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 POLR3HQ9Y535 204 aaPredicted RBP13.65□□□□□ -0.22
NPC1-201ENST00000269228 MYH6P13533 1939 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 RGSL1A5PLK6 1076 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 HSPA7P48741 367 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 PSME3P61289 254 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 MMAAQ8IVH4 418 aaKnown RBP13.65□□□□□ -0.22
NPC1-201ENST00000269228 ZC3H7AQ8IWR0 971 aaKnown RBP13.65□□□□□ -0.22
NPC1-201ENST00000269228 CPNE9Q8IYJ1 553 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 ZNF599Q96NL3 588 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 FIZ1Q96SL8 496 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 ROGDIQ9GZN7 287 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 GGA2Q9UJY4 613 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 ZNF711Q9Y462 761 aa13.65□□□□□ -0.22
NPC1-201ENST00000269228 MTF2Q9Y483 593 aaPredicted RBP13.65□□□□□ -0.22
NPC1-201ENST00000269228 SSR2P43308 183 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 POLD2P49005 469 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 MRPS22P82650 360 aaKnown RBP13.64□□□□□ -0.23
NPC1-201ENST00000269228 MS4A13Q5J8X5 152 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 DEPDC1Q5TB30 811 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 MSANTD2Q6P1R3 559 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 TCF12Q99081 682 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 PNPLA8Q9NP80 782 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 TIMM22Q9Y584 194 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 PTGER3P43115 390 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 IL5RAQ01344 420 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 ZNHIT3Q15649 155 aaPredicted RBP13.64□□□□□ -0.23
NPC1-201ENST00000269228 RNF43Q68DV7 783 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 Q6ZVU0 165 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 TRIM69Q86WT6 500 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 SIDT2Q8NBJ9 832 aaKnown RBP13.64□□□□□ -0.23
NPC1-201ENST00000269228 NACC2Q96BF6 587 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 DPEP2Q9H4A9 486 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 RERGLQ9H628 205 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 ZNF180Q9UJW8 692 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 GNEQ9Y223 722 aaKnown RBP13.64□□□□□ -0.23
NPC1-201ENST00000269228 OR51F1A6NGY5 319 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 FFAR2O15552 330 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 ALPIP09923 528 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 ZCCHC18P0CG32 403 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 NOS3P29474 1203 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 RPL3P39023 403 aaKnown RBP13.64□□□□□ -0.23
NPC1-201ENST00000269228 CHSY3Q70JA7 882 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 TCAIMQ8N3R3 496 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 TMCO5AQ8N6Q1 288 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 TSSK3Q96PN8 268 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 PANX1Q96RD7 426 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 VRTNQ9H8Y1 702 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 IL23AQ9NPF7 189 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 KAT6AQ92794 2004 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 CNTN5O94779 1100 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 ATP6V1G2O95670 118 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 ESR1P03372 595 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 TAS2R39P59534 338 aa13.64□□□□□ -0.23
NPC1-201ENST00000269228 KIAA0930Q6ICG6 404 aaPredicted RBP13.64□□□□□ -0.23
NPC1-201ENST00000269228 BHLHE22Q8NFJ8 381 aaPredicted RBP13.64□□□□□ -0.23
NPC1-201ENST00000269228 CLHC1Q8NHS4 586 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms