RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 FBXO39Q8N4B4 442 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 SEPT8Q92599 483 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 WBP2Q969T9 261 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 ATP6V1E2Q96A05 226 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 CYP2S1Q96SQ9 504 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 GPR21Q99679 349 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 SLC39A3Q9BRY0 314 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 TDRD1Q9BXT4 1180 aaKnown RBP12.84□□□□□ -0.35
CPSF6-201ENST00000266679 TTYH1Q9H313 450 aaPredicted RBP12.84□□□□□ -0.35
CPSF6-201ENST00000266679 EPS15L1Q9UBC2 864 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 FKBPLQ9UIM3 349 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 CROTQ9UKG9 612 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 SARDHQ9UL12 918 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 MED16Q9Y2X0 877 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 PCDHGC4Q9Y5F7 938 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 RAI2Q9Y5P3 530 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 DNAJC15Q9Y5T4 150 aa12.84□□□□□ -0.35
CPSF6-201ENST00000266679 MUC3AQ02505 3323 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-201ENST00000266679 ZNF840PA6NDX5 716 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 NCF1BA6NI72 391 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-201ENST00000266679 NCF1CA8MVU1 366 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-201ENST00000266679 C9JVG2 144 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 CDC7O00311 574 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 SCAMP3O14828 347 aaKnown RBP12.83□□□□□ -0.36
CPSF6-201ENST00000266679 DNAJA2O60884 412 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 KERAO60938 352 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 CLASP2O75122 1294 aaKnown RBP12.83□□□□□ -0.36
CPSF6-201ENST00000266679 CLDN11O75508 207 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 ECI2O75521 394 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 RNASEH2AO75792 299 aaKnown RBP12.83□□□□□ -0.36
CPSF6-201ENST00000266679 STC2O76061 302 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 PRLP01236 227 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 NCF1P14598 390 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-201ENST00000266679 GPX3P22352 226 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 OR1D2P34982 312 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 RAD51Q06609 339 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 ZNF177Q13360 481 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-201ENST00000266679 TLR1Q15399 786 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 ZNF697Q5TEC3 545 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 IL23RQ5VWK5 629 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 RNF219Q5W0B1 726 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-201ENST00000266679 KANK2Q63ZY3 851 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 ISLR2Q6UXK2 745 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 LINGO4Q6UY18 593 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 RHEBL1Q8TAI7 183 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 TMEM175Q9BSA9 504 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 MUC3BQ9H195 1237 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 BPIFA1Q9NP55 256 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 SPAG4Q9NPE6 437 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 SEMA4BQ9NPR2 832 aaPredicted RBP12.83□□□□□ -0.36
CPSF6-201ENST00000266679 SPATS2LQ9NUQ6 558 aaKnown RBP12.83□□□□□ -0.36
CPSF6-201ENST00000266679 TAS2R13Q9NYV9 303 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 GMPR2Q9P2T1 348 aaKnown RBP12.83□□□□□ -0.36
CPSF6-201ENST00000266679 GALPQ9UBC7 116 aa12.83□□□□□ -0.36
CPSF6-201ENST00000266679 C15orf38-AP3S2A0A0A6YYH1 394 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 A0A0U1RQS6 177 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 PRORSD1PA6NEY8 169 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 C2orf81A6NN90 581 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 LINC00032P0C843 101 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 CR2P20023 1033 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 RPL26P61254 145 aaKnown RBP12.82□□□□□ -0.36
CPSF6-201ENST00000266679 PLD1Q13393 1074 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 BFSP2Q13515 415 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 TRIM25Q14258 630 aaKnown RBP12.82□□□□□ -0.36
CPSF6-201ENST00000266679 PTPRNQ16849 979 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 PITRM1Q5JRX3 1037 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 TMEM240Q5SV17 173 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 PSAPL1Q6NUJ1 521 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 ARPINQ7Z6K5 226 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 FUNDC1Q8IVP5 155 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 GALNT4Q8N4A0 578 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 CATSPER1Q8NEC5 780 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 KIAA1191Q96A73 305 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 PLD4Q96BZ4 506 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 ASB2Q96Q27 587 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 SLC30A3Q99726 388 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 MRPL9Q9BYD2 267 aaKnown RBP12.82□□□□□ -0.36
CPSF6-201ENST00000266679 DERL2Q9GZP9 239 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 IL1RL2Q9HB29 575 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 SYTL2Q9HCH5 934 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 MRPL40Q9NQ50 206 aaKnown RBP12.82□□□□□ -0.36
CPSF6-201ENST00000266679 AK5Q9Y6K8 562 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 A0A0J9YYE9 177 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 A0A1B0GTL3 188 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.82□□□□□ -0.36
CPSF6-201ENST00000266679 ILVBLA1L0T0 632 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 CRCPO75575 148 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 SEC24AO95486 1093 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 C8BP07358 591 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 MC4RP32245 332 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 PBX2P40425 430 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 PSMD8P48556 350 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 SLC7A2P52569 658 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 CHN2P52757 468 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 CLCQ05315 142 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 UGT2A3Q6UWM9 527 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 CYP2R1Q6VVX0 501 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 TMEM102Q8N9M5 508 aaPredicted RBP12.82□□□□□ -0.36
CPSF6-201ENST00000266679 SIDT2Q8NBJ9 832 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms