RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 C1RP00736 705 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 PGFP49763 221 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 FAM189BP81408 668 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 MYBPC3Q14896 1274 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 PPM1LQ5SGD2 360 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 PRR23CQ6ZRP0 262 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 TUBGCP5Q96RT8 1024 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 AFF4Q9UHB7 1163 aaKnown RBP16.22■□□□□ 0.19
CTCF-201ENST00000264010 PCDHGC4Q9Y5F7 938 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 COPG1Q9Y678 874 aaKnown RBP16.22■□□□□ 0.19
CTCF-201ENST00000264010 SCAMP3O14828 347 aaKnown RBP16.22■□□□□ 0.19
CTCF-201ENST00000264010 GNRH1P01148 92 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 LRG1P02750 347 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 PKMP14618 531 aaKnown RBP16.22■□□□□ 0.19
CTCF-201ENST00000264010 ZNF7P17097 686 aaPredicted RBP16.22■□□□□ 0.19
CTCF-201ENST00000264010 PFKPQ01813 784 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 BTG3Q14201 252 aaPredicted RBP16.22■□□□□ 0.19
CTCF-201ENST00000264010 NRF1Q16656 503 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 GPR141Q7Z602 305 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 PQLC1Q8N2U9 271 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 C19orf60Q96EN9 201 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 OLFM1Q99784 485 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 C2orf49Q9BVC5 232 aaPredicted RBP16.22■□□□□ 0.19
CTCF-201ENST00000264010 PCDH12Q9NPG4 1184 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 LATS2Q9NRM7 1088 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 PRKCGP05129 697 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 MAGP20916 626 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 FGFR3P22607 806 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 TAF1AQ15573 450 aaPredicted RBP16.22■□□□□ 0.19
CTCF-201ENST00000264010 IMPG1Q17R60 797 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 RTP2Q5QGT7 225 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 CLEC6AQ6EIG7 209 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 PRMT9Q6P2P2 845 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 HGH1Q9BTY7 390 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 COPS7BQ9H9Q2 264 aaPredicted RBP16.22■□□□□ 0.19
CTCF-201ENST00000264010 NUMBLQ9Y6R0 609 aa16.22■□□□□ 0.19
CTCF-201ENST00000264010 DRGXA6NNA5 263 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 S1PR4O95977 384 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 ARSDP51689 593 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 PLOD1Q02809 727 aaPredicted RBP16.21■□□□□ 0.19
CTCF-201ENST00000264010 CES4AQ5XG92 561 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 NAT14Q8WUY8 206 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 HPS1Q92902 700 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 GKN1Q9NS71 199 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 DKK3Q9UBP4 350 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 RABL2BQ9UNT1 228 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 NDUFAF1Q9Y375 327 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 PCDHB9Q9Y5E1 797 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 AKAP10O43572 662 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 PARNO95453 639 aaKnown RBP16.21■□□□□ 0.19
CTCF-201ENST00000264010 HDCP19113 662 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 PDK3Q15120 406 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 C11orf91Q3C1V1 193 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 ADGRF1Q5T601 910 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 CD300LGQ6UXG3 332 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 NCCRP1Q6ZVX7 275 aaPredicted RBP16.21■□□□□ 0.19
CTCF-201ENST00000264010 NEK10Q6ZWH5 1172 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 PIM3Q86V86 326 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 IFNEQ86WN2 208 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 MYO1HQ8N1T3 1032 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 SCLYQ96I15 445 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 TRIM54Q9BYV2 358 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 SPAG4Q9NPE6 437 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 TEKT2Q9UIF3 430 aa16.21■□□□□ 0.19
CTCF-201ENST00000264010 UBXN8O00124 270 aa16.21■□□□□ 0.18
CTCF-201ENST00000264010 AURKAO14965 403 aa16.21■□□□□ 0.18
CTCF-201ENST00000264010 MSX2P35548 267 aaPredicted RBP16.21■□□□□ 0.18
CTCF-201ENST00000264010 BCL2L1Q07817 233 aa16.21■□□□□ 0.18
CTCF-201ENST00000264010 TRIM71Q2Q1W2 868 aaKnown RBP16.21■□□□□ 0.18
CTCF-201ENST00000264010 TTLL9Q3SXZ7 439 aa16.21■□□□□ 0.18
CTCF-201ENST00000264010 TXNDC11Q6PKC3 985 aa16.21■□□□□ 0.18
CTCF-201ENST00000264010 PXYLP1Q8TE99 480 aa16.21■□□□□ 0.18
CTCF-201ENST00000264010 DIS3LQ8TF46 1054 aaKnown RBP16.21■□□□□ 0.18
CTCF-201ENST00000264010 TFB2MQ9H5Q4 396 aaKnown RBP16.21■□□□□ 0.18
CTCF-201ENST00000264010 RETREG1Q9H6L5 497 aa16.21■□□□□ 0.18
CTCF-201ENST00000264010 ZBTB26Q9HCK0 441 aa16.21■□□□□ 0.18
CTCF-201ENST00000264010 MTF2Q9Y483 593 aaPredicted RBP16.21■□□□□ 0.18
CTCF-201ENST00000264010 V9GYQ6 96 aa16.21■□□□□ 0.18
CTCF-201ENST00000264010 A0A0D9SEW6 157 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 NRP2O60462 931 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 MLYCDO95822 493 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 PSMC3P17980 439 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 GLDCP23378 1020 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 HERVK_113P63132 956 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 UBE3AQ05086 875 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 TTC33Q6PID6 262 aaPredicted RBP16.2■□□□□ 0.18
CTCF-201ENST00000264010 GPR21Q99679 349 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 APOL5Q9BWW9 433 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 SPATA16Q9BXB7 569 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 ERVK-6Q9BXR3 956 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 FBXO9Q9UK97 447 aaPredicted RBP16.2■□□□□ 0.18
CTCF-201ENST00000264010 GRID2O43424 1007 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 KDELR3O43731 214 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 OR6B1O95007 311 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 CDH3P22223 829 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 TRIM25Q14258 630 aaKnown RBP16.2■□□□□ 0.18
CTCF-201ENST00000264010 NEDD8Q15843 81 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 LINGO4Q6UY18 593 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 MAVSQ7Z434 540 aa16.2■□□□□ 0.18
CTCF-201ENST00000264010 RBM12BQ8IXT5 1001 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms