RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 TUSC3Q13454 348 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 PGS1Q32NB8 556 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 ZNF678Q5SXM1 525 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 UBXN11Q5T124 520 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 LINGO4Q6UY18 593 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 UTS2BQ765I0 119 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 ERMP1Q7Z2K6 904 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 EFL1Q7Z2Z2 1120 aaKnown RBP4.72□□□□□ -1.65
USP44-201ENST00000258499 ADCK1Q86TW2 530 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 LRRTM3Q86VH5 581 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 MON1AQ86VX9 555 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 MFSD6LQ8IWD5 586 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 SLC15A3Q8IY34 581 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 CPNE9Q8IYJ1 553 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 OR10Q1Q8NGQ4 319 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 OR10T2Q8NGX3 314 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 SEPT8Q92599 483 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 GLMNQ92990 594 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 C12orf43Q96C57 262 aaKnown RBP4.72□□□□□ -1.65
USP44-201ENST00000258499 ASB2Q96Q27 587 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 HAPLN3Q96S86 360 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 DPY30Q9C005 99 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 CLPBQ9H078 707 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 ARMC7Q9H6L4 198 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 ZNF696Q9H7X3 374 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 TNFRSF12AQ9NP84 129 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 SMOXQ9NWM0 555 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 COMMD8Q9NX08 183 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 UBA2Q9UBT2 640 aaPredicted RBP4.72□□□□□ -1.65
USP44-201ENST00000258499 POLR3HQ9Y535 204 aaPredicted RBP4.72□□□□□ -1.65
USP44-201ENST00000258499 PCDHB5Q9Y5E4 795 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 A0A0U1RQS6 177 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 IQCF5A8MTL0 148 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 NME4O00746 187 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 FBP2O00757 339 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 KDM1AO60341 852 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 NOBOXO60393 691 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 TLR5O60602 858 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 SNAP91O60641 907 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 SEC22BO75396 215 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 RPP40O75818 363 aaKnown RBP4.72□□□□□ -1.65
USP44-201ENST00000258499 KCNH1O95259 989 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 SNAP29O95721 258 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 GSNP06396 782 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 CYP4B1P13584 511 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 CAPN3P20807 821 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 TPP2P29144 1249 aaPredicted RBP4.72□□□□□ -1.65
USP44-201ENST00000258499 MC4RP32245 332 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 GJA5P36382 358 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 PFKPQ01813 784 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 TNK2Q07912 1038 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 MAP2K5Q13163 448 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 UNC50Q53HI1 259 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 FBXL22Q6P050 247 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 SLC2A7Q6PXP3 512 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 RANBP10Q6VN20 620 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 LRRC8DQ7L1W4 858 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 ERI1Q8IV48 349 aaKnown RBP4.72□□□□□ -1.65
USP44-201ENST00000258499 SFRP1Q8N474 314 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 FIBCD1Q8N539 461 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 SIDT2Q8NBJ9 832 aaKnown RBP4.72□□□□□ -1.65
USP44-201ENST00000258499 PTERQ96BW5 349 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 FAM120BQ96EK7 910 aaKnown RBP4.72□□□□□ -1.65
USP44-201ENST00000258499 C1QTNF1Q9BXJ1 281 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 ACTR8Q9H981 624 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 FANCEQ9HB96 536 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 TMEM165Q9HC07 324 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 TLR8Q9NR97 1041 aaKnown RBP4.72□□□□□ -1.65
USP44-201ENST00000258499 IGSF5Q9NSI5 407 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 EXD2Q9NVH0 621 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 POLG2Q9UHN1 485 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 CRLS1Q9UJA2 301 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 EIF3LQ9Y262 564 aaKnown RBP4.72□□□□□ -1.65
USP44-201ENST00000258499 GIT1Q9Y2X7 761 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 SQORQ9Y6N5 450 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 KIAA1217Q5T5P2 1943 aa4.72□□□□□ -1.65
USP44-201ENST00000258499 SCN1AP35498 2009 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 BBIP1A8MTZ0 92 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 H3BNH8 94 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 TOR1BO14657 336 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 ACOT8O14734 319 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 RSL1D1O76021 490 aaKnown RBP4.71□□□□□ -1.65
USP44-201ENST00000258499 CST1P01037 141 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 FGF1P05230 155 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 ITGB1P05556 798 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 CAPN1P07384 714 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 SBK3P0C264 359 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 CDK4P11802 303 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 ZNF182P17025 639 aaPredicted RBP4.71□□□□□ -1.65
USP44-201ENST00000258499 RHOQP17081 205 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 HLA-DPA1P20036 260 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 CCNA2P20248 432 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 ALDH4A1P30038 563 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 OXTRP30559 389 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 KCNC1P48547 511 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 POLD2P49005 469 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 SLC11A2P49281 568 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 TMED10P49755 219 aaKnown RBP4.71□□□□□ -1.65
USP44-201ENST00000258499 RGS4P49798 205 aa4.71□□□□□ -1.65
USP44-201ENST00000258499 GNA12Q03113 381 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms