RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 AP5B1Q2VPB7 878 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ARHGAP40Q5TG30 622 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 UGT2A3Q6UWM9 527 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CREB3L2Q70SY1 520 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 SGMS1Q86VZ5 419 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 TMEM126BQ8IUX1 230 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 ZC3H7AQ8IWR0 971 aaKnown RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CADM3Q8N126 398 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 METTL25Q8N6Q8 603 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 TMEM35BQ8NCS4 154 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 RIPOR3Q96MK2 946 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 GLT1D1Q96MS3 346 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 OR2M4Q96R27 311 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 DPYSL5Q9BPU6 564 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CRB3Q9BUF7 120 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 DPCDQ9BVM2 203 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 BTBD1Q9H0C5 482 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 GAREM1Q9H706 876 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CHORDC1Q9UHD1 332 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 FBXL21Q9UKT6 434 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC9A8Q9Y2E8 581 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 PCYT1BQ9Y5K3 369 aaPredicted RBP6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 CEPT1Q9Y6K0 416 aa6.73□□□□□ -1.33
PDGFRA-201ENST00000257290 TERTO14746 1132 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 MSI1O43347 362 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PLIN3O60664 434 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TCF4P15884 667 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 ALDH4A1P30038 563 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 EIF2DP41214 584 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 VLDLRP98155 873 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 GIT2Q14161 759 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 RRP1BQ14684 758 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SBK1Q52WX2 424 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SETMARQ53H47 684 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 MZT2AQ6P582 158 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 WNT8AQ9H1J5 351 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 KAT8Q9H7Z6 458 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TAS2R3Q9NYW6 316 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 WHRNQ9P202 907 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TEX13CA0A0J9YWL9 993 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PNMA6FA0A0J9YX94 578 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SULT1C2O00338 296 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 ATG7O95352 703 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PAX6P26367 422 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 BMI1P35226 326 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TGFBR2P37173 567 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CACNB3P54284 484 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CHRNB3Q05901 458 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CAMK2DQ13557 499 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PPA1Q15181 289 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 VMACQ2NL98 169 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TOR2AQ5JU69 321 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SMYD5Q6GMV2 418 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 NUDT18Q6ZVK8 323 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TRMT1LQ7Z2T5 733 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 OR7G2Q8NG99 324 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 OR4Q3Q8NH05 313 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 ATXN3LQ9H3M9 355 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF556Q9HAH1 456 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CASS4Q9NQ75 786 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PCDHA1Q9Y5I3 950 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TRPV2Q9Y5S1 764 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PARP4Q9UKK3 1724 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 ATP6AP2A0A1C7CYW4 349 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 RGS13O14921 159 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SMIM6P0DI80 62 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 BMP3P12645 472 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 ZNF16P17020 682 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SYN1P17600 705 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TAC1P20366 129 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 MYL9P24844 172 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 BAMBIQ13145 260 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 FADDQ13158 208 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SLC18A3Q16572 532 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SHROOM1Q2M3G4 852 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 KHDRBS2Q5VWX1 349 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 EIF5AL1Q6IS14 154 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 C5orf46Q6UWT4 87 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TMPRSS11AQ6ZMR5 421 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 DENND5BQ6ZUT9 1274 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 UBE2R2Q712K3 238 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 ARCQ7LC44 396 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CACUL1Q86Y37 369 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PARP8Q8N3A8 854 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CLRN3Q8NCR9 226 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 LGMNQ99538 433 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 LACRTQ9GZZ8 138 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CRLF2Q9HC73 371 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TCF7L1Q9HCS4 588 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 INTS13Q9NVM9 706 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 COMMD9Q9P000 198 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 NXF1Q9UBU9 619 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 A0A0B4J269 797 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SOBPA7XYQ1 873 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 ACOX3O15254 700 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SERPINA6P08185 405 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 BGNP21810 368 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SHMT1P34896 483 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CYP2J2P51589 502 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CASP7P55210 303 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms