RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 FNDC3AQ9Y2H6 1198 aaKnown RBP23.24■■□□□ 1.31
SYNGR3-201ENST00000248121 TCF20Q9UGU0 1960 aaKnown RBP23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 SCN8AQ9UQD0 1980 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 DIAPH2O60879 1101 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 HMGCLP35914 325 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 BCL2L1Q07817 233 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 SLC20A2Q08357 652 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 ACCSLQ4AC99 568 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 Q6ZVU0 165 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 AHI1Q8N157 1196 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 OR2AP1Q8NGE2 309 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 MSLNLQ96KJ4 702 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 SLC25A13Q9UJS0 675 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 H3BMM5 538 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 OR1I1O60431 355 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 NPHS1O60500 1241 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 NDUFS3O75489 264 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 IGFBP4P22692 258 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 RPL14P50914 215 aaKnown RBP23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 PRKAA1Q13131 559 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 RINLQ6ZS11 566 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 RYBPQ8N488 228 aaPredicted RBP23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 ZNF366Q8N895 744 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 CHFRQ96EP1 664 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 CIPCQ9C0C6 399 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 ERVW-1Q9UQF0 538 aa23.23■■□□□ 1.31
SYNGR3-201ENST00000248121 A0A0J9YYE9 177 aa23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 PRRT4C9JH25 899 aa23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 SOX1O00570 391 aaPredicted RBP23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 GRID2O43424 1007 aa23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 IPO13O94829 963 aaKnown RBP23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 NFATC1O95644 943 aa23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 TRBC1P01850 177 aa23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 ENO1P06733 434 aaKnown RBP23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 LAMP2P13473 410 aa23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 KDSRQ06136 332 aa23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 FCHO2Q0JRZ9 810 aa23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 CDKN3Q16667 212 aa23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 CHST14Q8NCH0 376 aa23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 OBP2AQ9NY56 170 aa23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 GALPQ9UBC7 116 aa23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 COLQQ9Y215 455 aaPredicted RBP23.22■■□□□ 1.31
SYNGR3-201ENST00000248121 TTC34A8MYJ7 566 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 SOCS5O75159 536 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 IGSF6O95976 241 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 ESRRAP11474 423 aaPredicted RBP23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 RPL26P61254 145 aaKnown RBP23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 ASPHQ12797 758 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 PTPRNQ16849 979 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 LRIT3Q3SXY7 679 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 ZRANB3Q5FWF4 1079 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 DPY19L3Q6ZPD9 716 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 PIWIL4Q7Z3Z4 852 aaKnown RBP23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 METTL3Q86U44 580 aaKnown RBP23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 LONP2Q86WA8 852 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 RAB3IPQ96QF0 476 aaPredicted RBP23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 BTBD10Q9BSF8 475 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 CADM1Q9BY67 442 aaKnown RBP23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 SLC2A11Q9BYW1 496 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 GPR63Q9BZJ6 419 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 TAS2R1Q9NYW7 299 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 NCKIPSDQ9NZQ3 722 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 RPL26L1Q9UNX3 145 aaKnown RBP23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 FAM50BQ9Y247 325 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 TICRRQ7Z2Z1 1910 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 CXorf51AA0A1B0GTR3 108 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 GAPDHSO14556 408 aaPredicted RBP23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 SRP72O76094 671 aaKnown RBP23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 RHOBTB1O94844 696 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 POLR2EP19388 210 aaKnown RBP23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 MAPK8P45983 427 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 CPA2P48052 419 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 CTSL3PQ5NE16 218 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 PAQR3Q6TCH7 311 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 RPS27LQ71UM5 84 aaKnown RBP23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 KDM1BQ8NB78 822 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 OR52B2Q96RD2 323 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 LMCD1Q9NZU5 365 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 SORCS3Q9UPU3 1222 aa23.21■■□□□ 1.31
SYNGR3-201ENST00000248121 HDAC3O15379 428 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 ATP6V1G2O95670 118 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 JUNP05412 331 aaKnown RBP23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 AOC1P19801 751 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 CCNHP51946 323 aaPredicted RBP23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 PDAP1Q13442 181 aaKnown RBP23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 RIPK1Q13546 671 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 OR4D1Q15615 310 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 CFAP157Q5JU67 520 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 KIAA1958Q8N8K9 716 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 FBXO27Q8NI29 283 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 PHF21BQ96EK2 531 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 SLC30A3Q99726 388 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 ATP13A3Q9H7F0 1226 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 PKP3Q9Y446 797 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 HNRNPLP14866 589 aaKnown RBP eCLIP23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 CA5AP35218 305 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 HNF1BP35680 557 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 TTPAP49638 278 aa23.2■■□□□ 1.3
SYNGR3-201ENST00000248121 SEMG2Q02383 582 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms