RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 OXSMQ9NWU1 459 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 ARL2BPQ9Y2Y0 163 aa14.12□□□□□ -0.15
SDF2-201ENST00000247020 TMEM114B3SHH9 223 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 H0Y858 1186 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 TRIM13O60858 407 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 RHOBTB1O94844 696 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 C1SP09871 688 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 PRSS56P0CW18 603 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 CCDC166P0CW27 439 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 TNFRSF4P43489 277 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 CDKN1CP49918 316 aaPredicted RBP14.11□□□□□ -0.15
SDF2-201ENST00000247020 IRX4P78413 519 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 TIAL1Q01085 375 aaKnown RBP eCLIP14.11□□□□□ -0.15
SDF2-201ENST00000247020 ELP6Q0PNE2 266 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 DLG1Q12959 904 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 CSHL1Q14406 222 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 LIPMQ5VYY2 423 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 FAM151BQ6UXP7 276 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 SERPINA13PQ6UXR4 307 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 EP400NLQ6ZTU2 488 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 YTHDF3Q7Z739 585 aaKnown RBP14.11□□□□□ -0.15
SDF2-201ENST00000247020 SERPINA9Q86WD7 417 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 C10orf107Q8IVU9 208 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 NKAPQ8N5F7 415 aaKnown RBP14.11□□□□□ -0.15
SDF2-201ENST00000247020 CSGALNACT1Q8TDX6 532 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 HEXDCQ8WVB3 486 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 CHFRQ96EP1 664 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 SCYL1Q96KG9 808 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 TRIM55Q9BYV6 548 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 SMOXQ9NWM0 555 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 XPR1Q9UBH6 696 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 PPM1HQ9ULR3 514 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 OAS3Q9Y6K5 1087 aaKnown RBP14.11□□□□□ -0.15
SDF2-201ENST00000247020 NUMBLQ9Y6R0 609 aa14.11□□□□□ -0.15
SDF2-201ENST00000247020 C1QTNF3-AMACRE9PGA6 284 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 KCNA4P22459 653 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 FMO4P31512 558 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 MMP12P39900 470 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 ATP6V0D1P61421 351 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 ADGRE1Q14246 886 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 GLIPR1L2Q4G1C9 344 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 CRLF3Q8IUI8 442 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 NXPE1Q8N323 547 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 GPR26Q8NDV2 337 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 RHEBL1Q8TAI7 183 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 KCNV2Q8TDN2 545 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 GAS2L1Q99501 681 aaPredicted RBP14.1□□□□□ -0.15
SDF2-201ENST00000247020 DERL2Q9GZP9 239 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 CLPBQ9H078 707 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 PCDH12Q9NPG4 1184 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 CRLS1Q9UJA2 301 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 GNPTGQ9UJJ9 305 aa14.1□□□□□ -0.15
SDF2-201ENST00000247020 A0A0U1RQS6 177 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 F8W8V4 182 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 TK2O00142 265 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 SBK3P0C264 359 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 ATP5F1P24539 256 aaPredicted RBP14.09□□□□□ -0.15
SDF2-201ENST00000247020 SERPINB5P36952 375 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 GMPRP36959 345 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 DNAJB13P59910 316 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 PFKPQ01813 784 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 CHRNA6Q15825 494 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 CRY1Q16526 586 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 CTSL3PQ5NE16 218 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 FOXR1Q6PIV2 292 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 PARS2Q7L3T8 475 aaKnown RBP14.09□□□□□ -0.15
SDF2-201ENST00000247020 TTC7BQ86TV6 843 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 SLC22A9Q8IVM8 553 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 NRSN1Q8IZ57 195 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 PIP4K2CQ8TBX8 421 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 TFB2MQ9H5Q4 396 aaKnown RBP14.09□□□□□ -0.15
SDF2-201ENST00000247020 FAM96AQ9H5X1 160 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 ZDHHC3Q9NYG2 299 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 MED16Q9Y2X0 877 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 USH1CQ9Y6N9 552 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 TNRC18O15417 2968 aaPredicted RBP14.09□□□□□ -0.15
SDF2-201ENST00000247020 IGLV3-16A0A075B6K0 115 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 E5RI56 91 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 KPNA3O00505 521 aaPredicted RBP14.09□□□□□ -0.15
SDF2-201ENST00000247020 CD1DP15813 335 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 SP100P23497 879 aaPredicted RBP14.09□□□□□ -0.15
SDF2-201ENST00000247020 IL12RB1P42701 662 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 NSG1P42857 185 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 GLRBP48167 497 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 SLC1A6P48664 564 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 HK2P52789 917 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 NFKB2Q00653 900 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 RALGDSQ12967 914 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 FAM46CQ5VWP2 391 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 TMEM207Q6UWW9 146 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 MACC1Q6ZN28 852 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 TRAM1L1Q8N609 369 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 ZNF366Q8N895 744 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 PNPLA1Q8N8W4 532 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 PPP4R1Q8TF05 950 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 ANKRD49Q8WVL7 239 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 C10orf82Q8WW14 230 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 RAB7BQ96AH8 199 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 FAM129BQ96TA1 746 aa14.09□□□□□ -0.15
SDF2-201ENST00000247020 P2RY13Q9BPV8 354 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms