RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 OR4D1Q15615 310 aa15.45■□□□□ 0.06
DDX55-201ENST00000238146 CYP2A13Q16696 494 aa15.45■□□□□ 0.06
DDX55-201ENST00000238146 BROXQ5VW32 411 aa15.45■□□□□ 0.06
DDX55-201ENST00000238146 ITIH5Q86UX2 942 aa15.45■□□□□ 0.06
DDX55-201ENST00000238146 LEMD2Q8NC56 503 aa15.45■□□□□ 0.06
DDX55-201ENST00000238146 TSPEARQ8WU66 669 aa15.45■□□□□ 0.06
DDX55-201ENST00000238146 RAB2BQ8WUD1 216 aa15.45■□□□□ 0.06
DDX55-201ENST00000238146 OSCP1Q8WVF1 389 aa15.45■□□□□ 0.06
DDX55-201ENST00000238146 BDH2Q9BUT1 245 aa15.45■□□□□ 0.06
DDX55-201ENST00000238146 LHPPQ9H008 270 aa15.45■□□□□ 0.06
DDX55-201ENST00000238146 GPN2Q9H9Y4 310 aaPredicted RBP15.45■□□□□ 0.06
DDX55-201ENST00000238146 NTN4Q9HB63 628 aa15.45■□□□□ 0.06
DDX55-201ENST00000238146 PCDHGA11Q9Y5H2 935 aa15.45■□□□□ 0.06
DDX55-201ENST00000238146 TTC36A6NLP5 189 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 SYNCRIPO60506 623 aaKnown RBP15.44■□□□□ 0.06
DDX55-201ENST00000238146 PAPSS2O95340 614 aaPredicted RBP15.44■□□□□ 0.06
DDX55-201ENST00000238146 HRH2P25021 359 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 HALP42357 657 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 ECT2LQ008S8 904 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 TIAL1Q01085 375 aaKnown RBP eCLIP15.44■□□□□ 0.06
DDX55-201ENST00000238146 TUBA3CQ13748 450 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 MANEALQ5VSG8 457 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 GTF2IRD2BQ6EKJ0 949 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 TIGD7Q6NT04 549 aaPredicted RBP15.44■□□□□ 0.06
DDX55-201ENST00000238146 TMEM214Q6NUQ4 689 aaKnown RBP15.44■□□□□ 0.06
DDX55-201ENST00000238146 ZNF549Q6P9A3 640 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 GTF2IRD2Q86UP8 949 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 BPIFB1Q8TDL5 484 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 SLC35B4Q969S0 331 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 RNF145Q96MT1 663 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 KATNBL1Q9H079 304 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 SLC25A51Q9H1U9 297 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 MFSD1Q9H3U5 465 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 CATSPERBQ9H7T0 1116 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 GMIPQ9P107 970 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 B3GNT3Q9Y2A9 372 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 TRIM43BA6NCK2 446 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 RRN3P2A6NIE6 340 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 FGF10O15520 208 aaPredicted RBP15.44■□□□□ 0.06
DDX55-201ENST00000238146 IGLV3-25P01717 112 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 FDXRP22570 491 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 OXCT1P55809 520 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 EEFSECP57772 596 aaKnown RBP15.44■□□□□ 0.06
DDX55-201ENST00000238146 KCNK10P57789 538 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 BFSP2Q13515 415 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 EIF4EBP2Q13542 120 aaPredicted RBP15.44■□□□□ 0.06
DDX55-201ENST00000238146 SNX17Q15036 470 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 ZNF792Q3KQV3 632 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 AASDHQ4L235 1098 aaPredicted RBP15.44■□□□□ 0.06
DDX55-201ENST00000238146 RAB44Q7Z6P3 723 aaPredicted RBP15.44■□□□□ 0.06
DDX55-201ENST00000238146 IGFN1Q86VF2 1251 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 SGCDQ92629 289 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 DCPSQ96C86 337 aaKnown RBP15.44■□□□□ 0.06
DDX55-201ENST00000238146 SMARCD1Q96GM5 515 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 PIF1Q9H611 641 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 KCTD3Q9Y597 815 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 PTCH2Q9Y6C5 1203 aa15.44■□□□□ 0.06
DDX55-201ENST00000238146 CXCL11O14625 94 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 RSL1D1O76021 490 aaKnown RBP15.43■□□□□ 0.06
DDX55-201ENST00000238146 CYBBP04839 570 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 LHX1P48742 406 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 ARSFP54793 590 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 IHHQ14623 411 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 FCRL2Q96LA5 508 aaPredicted RBP15.43■□□□□ 0.06
DDX55-201ENST00000238146 ING2Q9H160 280 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 INTS7Q9NVH2 962 aaKnown RBP15.43■□□□□ 0.06
DDX55-201ENST00000238146 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.43■□□□□ 0.06
DDX55-201ENST00000238146 MPP6Q9NZW5 540 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 MROH6A6NGR9 719 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 UPK1AO00322 258 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 TNPO2O14787 897 aaKnown RBP15.43■□□□□ 0.06
DDX55-201ENST00000238146 ABCB7O75027 752 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 EEDO75530 441 aaKnown RBP15.43■□□□□ 0.06
DDX55-201ENST00000238146 HOXD8P13378 290 aaPredicted RBP15.43■□□□□ 0.06
DDX55-201ENST00000238146 CASP2P42575 452 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 MAXP61244 160 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 RIMKLAQ8IXN7 391 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 DNAJB3Q8WWF6 145 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 ITPKCQ96DU7 683 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 PABPC5Q96DU9 382 aaKnown RBP15.43■□□□□ 0.06
DDX55-201ENST00000238146 IMP4Q96G21 291 aaKnown RBP15.43■□□□□ 0.06
DDX55-201ENST00000238146 ATOH8Q96SQ7 321 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 TSPYL2Q9H2G4 693 aaPredicted RBP15.43■□□□□ 0.06
DDX55-201ENST00000238146 TIMM22Q9Y584 194 aa15.43■□□□□ 0.06
DDX55-201ENST00000238146 IRAK2O43187 625 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 PEX11BO96011 259 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 C1RP00736 705 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 PRR35P0CG20 571 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 TCF3P15923 654 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 SMPD1P17405 629 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 CRHBPP24387 322 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 HTR1EP28566 365 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 CD86P42081 329 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 IREB2P48200 963 aaKnown RBP15.42■□□□□ 0.06
DDX55-201ENST00000238146 ALDH3A2P51648 485 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 PLA2G16P53816 162 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 OR4D2P58180 307 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 UFM1P61960 85 aa15.42■□□□□ 0.06
DDX55-201ENST00000238146 BTG3Q14201 252 aaPredicted RBP15.42■□□□□ 0.06
DDX55-201ENST00000238146 POLD3Q15054 466 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms