RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 C2orf74A8MZ97 194 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 NT5C1B-RDH14C9J2C7 533 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 DYNC1LI2O43237 492 aaPredicted RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 ATP6AP2O75787 350 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 ANXA9O76027 345 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 TMEM63AO94886 807 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 CPOXP36551 454 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 BTN1A1Q13410 526 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 ECM1Q16610 540 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 GPAT3Q53EU6 434 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 METTL2BQ6P1Q9 378 aaKnown RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 ZNF549Q6P9A3 640 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 LINC00299Q6ZSB3 139 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 C15orf52Q6ZUT6 534 aaKnown RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 RRM2BQ7LG56 351 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 CPNE8Q86YQ8 564 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 TTC29Q8NA56 475 aaPredicted RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 OR2T12Q8NG77 320 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 OR6B3Q8NGW1 331 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 BPIFB1Q8TDL5 484 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 ANKRD49Q8WVL7 239 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 RXFP2Q8WXD0 754 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 CRAMP1Q96RY5 1269 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 TRMOQ9BU70 441 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 MED11Q9P086 117 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 AAR2Q9Y312 384 aaKnown RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 TARBP1Q13395 1621 aaKnown RBP12.83□□□□□ -0.36
VAMP4-201ENST00000236192 ANKRD26Q9UPS8 1709 aa12.83□□□□□ -0.36
VAMP4-201ENST00000236192 PRSS51A0A1B0GVH4 220 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 FAM86B1E9PN63 330 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 FGF3P11487 239 aaPredicted RBP12.82□□□□□ -0.36
VAMP4-201ENST00000236192 GSTM5P46439 218 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 RAB10P61026 200 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 USF2Q15853 346 aaPredicted RBP12.82□□□□□ -0.36
VAMP4-201ENST00000236192 CDKL4Q5MAI5 379 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 SHQ1Q6PI26 577 aaKnown RBP12.82□□□□□ -0.36
VAMP4-201ENST00000236192 ZNF416Q9BWM5 594 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 RIOX1Q9H6W3 641 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 HPF1Q9NWY4 346 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 CD48P09326 243 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 ARSFP54793 590 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 RPL7AP62424 266 aaKnown RBP12.82□□□□□ -0.36
VAMP4-201ENST00000236192 TIFABQ6ZNK6 161 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 C16orf86Q6ZW13 317 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 LRRC71Q8N4P6 559 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 MEIOBQ8N635 442 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 PTERQ96BW5 349 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 CRELD1Q96HD1 420 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 MAP6Q96JE9 813 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
VAMP4-201ENST00000236192 IL17RBQ9NRM6 502 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 SNTG1Q9NSN8 517 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 DLGAP1O14490 977 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 MYL3P08590 195 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 LTA4HP09960 611 aaKnown RBP12.82□□□□□ -0.36
VAMP4-201ENST00000236192 MTHFD1P11586 935 aaKnown RBP12.82□□□□□ -0.36
VAMP4-201ENST00000236192 IVDP26440 423 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 RORAP35398 523 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 GRSF1Q12849 480 aaKnown RBP eCLIP12.82□□□□□ -0.36
VAMP4-201ENST00000236192 NR6A1Q15406 480 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 CORO6Q6QEF8 472 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 KDELC2Q7Z4H8 507 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 MFSD2AQ8NA29 543 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 DPCDQ9BVM2 203 aaPredicted RBP12.82□□□□□ -0.36
VAMP4-201ENST00000236192 NANOGQ9H9S0 305 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 BIN3Q9NQY0 253 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 RIMKLBQ9ULI2 386 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 ZNF879B4DU55 563 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 XPNPEP2O43895 674 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 NPHS1O60500 1241 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 SLC22A3O75751 556 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 CDH17Q12864 832 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 NOMO1Q15155 1222 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 SAMD14Q8IZD0 417 aaPredicted RBP12.82□□□□□ -0.36
VAMP4-201ENST00000236192 ESX1Q8N693 406 aa12.82□□□□□ -0.36
VAMP4-201ENST00000236192 A0A0A0MRY4 1105 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 CAPZA2P47755 286 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 NDST1P52848 882 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 PRKG2Q13237 762 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 CLCA4Q14CN2 919 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 KCNT2Q6UVM3 1135 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 TPD52L3Q96J77 140 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 SPATA13Q96N96 652 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 PTPRHQ9HD43 1115 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 PAK6Q9NQU5 681 aaPredicted RBP12.81□□□□□ -0.36
VAMP4-201ENST00000236192 COPZ2Q9P299 210 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 NUFIP1Q9UHK0 495 aaKnown RBP12.81□□□□□ -0.36
VAMP4-201ENST00000236192 CMAHPQ9Y471 501 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 EFCAB14O75071 495 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 TRUB2O95900 331 aaKnown RBP12.81□□□□□ -0.36
VAMP4-201ENST00000236192 HPRP00739 348 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 CALCAP01258 141 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 MLNP12872 115 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 DNAJB2P25686 324 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 SELENBP1Q13228 472 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 PCLAFQ15004 111 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 EMC2Q15006 297 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 DEF8Q6ZN54 512 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 SPATA19Q7Z5L4 167 aa12.81□□□□□ -0.36
VAMP4-201ENST00000236192 HAS1Q92839 578 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms