RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 PSEN2P49810 448 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 SLC7A2P52569 658 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 SPIBQ01892 262 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 GALNT3Q14435 633 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 SEMA3AQ14563 771 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 TRAM1Q15629 374 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ARSHQ5FYA8 562 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 PTCHD4Q6ZW05 846 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 GPALPP1Q8IXQ4 340 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 FAM47BQ8NA70 645 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 TTLQ8NG68 377 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ZNF599Q96NL3 588 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 CAMK1GQ96NX5 476 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 NEDD4LQ96PU5 975 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 PANX1Q96RD7 426 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 NTPCRQ9BSD7 190 aaKnown RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 C1QTNF1Q9BXJ1 281 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 PCDH18Q9HCL0 1135 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ZDHHC4Q9NPG8 344 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 KLHL1Q9NR64 748 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 LRRC42Q9Y546 428 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 LYPLA1O75608 230 aaPredicted RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 CLDN9O95484 217 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 CDH1P12830 882 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 PPM1AP35813 382 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 CCNFP41002 786 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 STARP49675 285 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ERFP50548 548 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 HERVK_113P63132 956 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 MKRN4PQ13434 485 aaPredicted RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 DDX39BQ13838 428 aaKnown RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 REP15Q6BDI9 236 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 SULT1C3Q6IMI6 304 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 GCNT7Q6ZNI0 430 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 CHSY3Q70JA7 882 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 MIB1Q86YT6 1006 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 CHPFQ8IZ52 775 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ACER1Q8TDN7 264 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 C10orf82Q8WW14 230 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ERVK-6Q9BXR3 956 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 SEMA4BQ9NPR2 832 aaPredicted RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 MIOSQ9NXC5 875 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 GNEQ9Y223 722 aaKnown RBP4.4□□□□□ -1.71
CHD9-201ENST00000219084 PDE10AQ9Y233 779 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 COQ4Q9Y3A0 265 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 PCDHGB7Q9Y5F8 929 aa4.4□□□□□ -1.71
CHD9-201ENST00000219084 ISPDA4D126 451 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ZNF701M0R085 212 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 PITPNM1O00562 1244 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ATG13O75143 517 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 AMHP03971 560 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 C8BP07358 591 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 MYBL2P10244 700 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 KIR3DL1P43629 444 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 EEFSECP57772 596 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 RPL19P84098 196 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 TMEM62Q0P6H9 643 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TRIM32Q13049 653 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 SMAD1Q15797 465 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 DACT2Q5SW24 774 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 FAM46CQ5VWP2 391 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CATSPERGQ6ZRH7 1159 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 RINLQ6ZS11 566 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ZCCHC23Q6ZST2 131 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CHST15Q7LFX5 561 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 XYLT1Q86Y38 959 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 OR4A15Q8NGL6 344 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 B3GALT6Q96L58 329 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 SENP8Q96LD8 212 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 NODALQ96S42 347 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 SYNDIG1Q9H7V2 258 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 FBXO6Q9NRD1 293 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 ZNF282Q9UDV7 671 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 SFMBT1Q9UHJ3 866 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 FBXO5Q9UKT4 447 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 HEBP2Q9Y5Z4 205 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 A0A1W2PQ72 361 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 TTLL13PA6NNM8 815 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 H0YAE9 185 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 FGBP02675 491 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 CCNYL3P0C7X3 344 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 KLRK1P26718 216 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 DPYSL2Q16555 572 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ASTE1Q2TB18 679 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 GCNT6Q5T4J0 391 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 GPR107Q5VW38 600 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 KIAA0930Q6ICG6 404 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 GET4Q7L5D6 327 aaPredicted RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 IRF2BP1Q8IU81 584 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ZC3H3Q8IXZ2 948 aaKnown RBP4.39□□□□□ -1.71
CHD9-201ENST00000219084 LGI2Q8N0V4 545 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 MTMR14Q8NCE2 650 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 C11orf65Q8NCR3 313 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 KCTD13Q8WZ19 329 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 PDCD10Q9BUL8 212 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 NMUR2Q9GZQ4 415 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 LRTM1Q9HBL6 345 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 XPR1Q9UBH6 696 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 ZNF780BQ9Y6R6 833 aa4.39□□□□□ -1.71
CHD9-201ENST00000219084 A0A0X1KG70 313 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms