RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 APOC2P02655 101 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 PDHA1P08559 390 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 CYP2A6P11509 494 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 VIPR1P32241 457 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 EPHB1P54762 984 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 LRRC14Q15048 493 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 PRKD1Q15139 912 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 IRF4Q15306 451 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 ALG11Q2TAA5 492 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 FAM182AQ5T1J6 154 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 ZC3H18Q86VM9 953 aaKnown RBP18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 DTX1Q86Y01 620 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 ALG3Q92685 438 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 AGAP3Q96P47 875 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 TDRD1Q9BXT4 1180 aaKnown RBP18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 EPN3Q9H201 632 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 ADNPQ9H2P0 1102 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 CHKBQ9Y259 395 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 EFR3BQ9Y2G0 817 aa18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 USP9XQ93008 2570 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC6A-201ENST00000006275 CCDC175P0C221 793 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 PYGMP11217 842 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 CD82P27701 267 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 HTR1BP28222 390 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 PTPN7P35236 360 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 CD86P42081 329 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 CCZ1BP86790 482 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 CCZ1P86791 482 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 ZFP36L1Q07352 338 aaKnown RBP18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 IHHQ14623 411 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 SKIDA1Q1XH10 827 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 TEX44Q53QW1 395 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 AADACL2Q6P093 401 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 ENPP7Q6UWV6 458 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 USP45Q70EL2 814 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 PIH1D2Q8WWB5 315 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 SCRN2Q96FV2 425 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 PCDH9Q9HC56 1237 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 PPIL1Q9Y3C6 166 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 MYO9AB2RTY4 2548 aa18.86■□□□□ 0.61
TRAPPC6A-201ENST00000006275 SCN8AQ9UQD0 1980 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 HACD1B0YJ81 288 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 C9orf172C9J069 976 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 H7C0C1 242 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 RECQL5O94762 991 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 CTPS1P17812 591 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 PTPN3P26045 913 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 ATP5OP48047 213 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 ARHGEF7Q14155 803 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 ACOX1Q15067 660 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 AGERQ15109 404 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 CNGA3Q16281 694 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 WSCD2Q2TBF2 565 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 PHF19Q5T6S3 580 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 DENND2CQ68D51 928 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 BORAQ6PGQ7 559 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 JPH3Q8WXH2 748 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 HERPUD2Q9BSE4 406 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 KLQ9UEF7 1012 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 RNF215Q9Y6U7 377 aa18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 SPTBN1Q01082 2364 aaKnown RBP18.85■□□□□ 0.61
TRAPPC6A-201ENST00000006275 NPIPB15A6NHN6 443 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 DDX3YO15523 660 aaKnown RBP18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 MTSS1O43312 755 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 HEXIM1O94992 359 aaKnown RBP18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 TJP3O95049 919 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 PCCBP05166 539 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 MMP2P08253 660 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 SRP54P61011 504 aaKnown RBP18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 XRCC4Q13426 336 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 NFATC4Q14934 902 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 NOMO1Q15155 1222 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 TMEM164Q5U3C3 297 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 LPCAT1Q8NF37 534 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 GPR156Q8NFN8 814 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 TEKT5Q96M29 485 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 QKIQ96PU8 341 aaKnown RBP eCLIP18.84■□□□□ 0.616e-6■■■■□ 23.1
TRAPPC6A-201ENST00000006275 MCCC1Q96RQ3 725 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 RBM15Q96T37 977 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 SLC25A51Q9H1U9 297 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 GLOD4Q9HC38 313 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 AKAP7Q9P0M2 348 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 APPL1Q9UKG1 709 aa18.84■□□□□ 0.61
TRAPPC6A-201ENST00000006275 A0A0J9YYE9 177 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 PRLP01236 227 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 TRBC1P01850 177 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 PTMAP06454 111 aaKnown RBP18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 GLB1P16278 677 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 LHCGRP22888 699 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 ATP1A2P50993 1020 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 RPL26P61254 145 aaKnown RBP18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 FOXK1P85037 733 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 OTUD4Q01804 1114 aaKnown RBP18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 KCNAB2Q13303 367 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 MTM1Q13496 603 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 PTPRRQ15256 657 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 IGFBP7Q16270 282 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 CERCAMQ5T4B2 595 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 SPRED1Q7Z699 444 aa18.83■□□□□ 0.6
TRAPPC6A-201ENST00000006275 ATL2Q8NHH9 583 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms