RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Slc5a12Q49B93 619 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Eme2Q56A04 373 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ripk1Q60855 656 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Six4Q61321 775 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Epha7Q61772 998 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 TrhQ62361 256 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ahcyl2Q68FL4 613 aaKnown RBP9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 MffQ6PCP5 291 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ap4e1Q80V94 1122 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 EmsyQ8BMB0 1264 aaKnown RBP9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Mterf4Q8BVN4 346 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fam234aQ8C0Z1 555 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ccz1Q8C1Y8 480 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Rfwd3Q8CIK8 774 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Q8K039 155 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Trib2Q8K4K3 343 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ascc2Q91WR3 749 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Bag2Q91YN9 210 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ciao1Q99KN2 339 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gng10Q9CXP8 68 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Q9CYS6 286 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Nt5c3aQ9D020 331 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Asah2Q9JHE3 756 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Zbtb32Q9JKD9 465 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Mmel1Q9JLI3 765 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cyth1Q9QX11 398 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Decr2Q9WV68 292 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 NcdnQ9Z0E0 729 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fkbp9Q9Z247 570 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Krt6bQ9Z331 562 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 UtrnE9Q6R7 3430 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Rdh8D3Z6W3 317 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cyp2c23E9Q5K4 494 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Mtnd2P03893 345 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Polr1cP52432 346 aaKnown RBP9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 NptnP97300 397 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ceacam19Q3TQ88 271 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fam160a2Q3U2I3 975 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fcho2Q3UQN2 809 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ccdc51Q3URS9 406 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Trappc3lQ4KL14 181 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Map2k2Q63932 401 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tlr12Q6QNU9 906 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Snx14Q8BHY8 964 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Sec62Q8BU14 398 aaKnown RBP9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cdc34Q8CFI2 235 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Fam174bQ8K064 153 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr1033Q8VFK5 310 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr410Q8VFX7 315 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Sec63Q8VHE0 760 aaKnown RBP9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Med15Q924H2 789 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Q9CQ90 155 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Lamp5Q9D387 280 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Dpysl5Q9EQF6 564 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Irx4Q9QY61 515 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 SnapinQ9Z266 136 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gm28036V9GXJ1 658 aa9.04□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr391-psA0A0U1RNJ4 312 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gm21885A0A286YDN8 145 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Esp22A8R0V4 111 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gnai1B2RSH2 354 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Macc1E9PXX8 851 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 OgdhlE9Q7L0 1029 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 2610001J05RikF2Z3Y9 59 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 IfnabL7MTU6 190 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gp5O08742 567 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 CrcpO35427 148 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Klrk1O54709 232 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 GmnnO88513 206 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 LgmnO89017 435 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Rps16P14131 146 aaKnown RBP9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Rab6bP61294 208 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Pde1bQ01065 535 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Kcnh6Q32ME0 950 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ap5b1Q3TAP4 876 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Tmem26Q3UP23 366 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Snx25Q3ZT31 840 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ptpn18Q61152 453 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Hoxa13Q62424 386 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gpd2Q64521 727 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Otop1Q80VM9 600 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Thnsl2Q80W22 483 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Zfyve1Q810J8 777 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Q8BGK9 164 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Npsr1Q8BZP8 371 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Ankmy1Q8C0W1 906 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Vash2Q8C5G2 355 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 March11Q8CBH7 400 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Lrrc45Q8CIM1 670 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Spata2Q8K004 515 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Olfr815Q8VFU0 316 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 MgarpQ8VI64 283 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Sgo1Q9CXH7 517 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 CrtapQ9CYD3 400 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 PacrgQ9DAK2 241 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Gnai3Q9DC51 354 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Riox1Q9JJF3 603 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Lgals8Q9JL15 316 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Nfu1Q9QZ23 255 aa9.03□□□□□ -0.96
Upf3b-201ENSMUST00000076265 Cdh17Q9R100 827 aa9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms