RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Ttc39cQ8VE09 580 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Setd7Q8VHL1 366 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Pycr2Q922Q4 320 aaKnown RBP9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Pwp1Q99LL5 501 aaKnown RBP9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Lrrc40Q9CRC8 602 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Oxct1Q9D0K2 520 aaKnown RBP9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Klhdc8bQ9D2D9 354 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Armc1Q9D7A8 282 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Btbd35f16A0A087WSN2 498 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Rhbdl2A2AGA4 302 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ctnnd2O35927 1247 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Serpina3kP07759 418 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Zfp14P10755 501 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cd86P42082 309 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ufm1P61961 85 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Brms1lQ3U1T3 323 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 JrkQ60976 557 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Slc6a3Q61327 619 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 TsnQ62348 228 aaKnown RBP9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cyp4b1Q64462 511 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Letm2Q7TNU7 480 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr1128Q7TR47 311 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Btnl1Q7TST0 509 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Amigo2Q80ZD9 519 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 R3hcc1lQ8BJM3 775 aaKnown RBP9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Bend5Q8C6D4 421 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 4932414N04RikQ8CEQ9 752 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Zbtb6Q8K088 423 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Stk32cQ8QZV4 488 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 HnrnprQ8VHM5 632 aaKnown RBP9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 DeraQ91YP3 318 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Mat2bQ99LB6 334 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Nuf2Q99P69 463 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 PudpQ9D5U5 234 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 B4galt4Q9JJ04 344 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Rgs17Q9QZB0 210 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Fzd9Q9R216 592 aa9.76□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 4930558K02RikE0CXC6 182 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm8369E9PZI3 166 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm3739L7N296 216 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Fgf10O35565 209 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ldb2O55203 373 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Slc2a4P14142 509 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Fbln2P37889 1221 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cdh6P97326 790 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Afg1lQ3V384 480 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gba2Q69ZF3 918 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Lingo3Q6GQU6 589 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cdc14bQ6PFY9 485 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Fbxo48Q8CAT8 161 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr695Q8VFM3 315 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Slc22a7Q91WU2 540 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Slc5a2Q923I7 670 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gemin2Q9CQQ4 269 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Tmem135Q9CYV5 458 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Zcchc12Q9CZA5 402 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Hddc3Q9D114 179 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Sh2d4aQ9D7V1 421 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Dhx34Q9DBV3 1145 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ppp1r2Q9DCL8 206 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ndst3Q9EQH7 873 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Oxct2bQ9ESL0 520 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Oxct2aQ9JJN4 520 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Numa1E9Q7G0 2094 aaKnown RBP9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm12800B1AUV4 484 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Dthd1E9PZX1 795 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Fbrsl1E9Q9T0 1031 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm12794L7MTS5 483 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gp5O08742 567 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 NapsaO09043 419 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Aff2O55112 1272 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 CcnoP0C242 352 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cct8P42932 548 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Faf1P54731 649 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ptpn5P54830 541 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Tuba4aP68368 448 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Pdap1Q3UHX2 181 aaKnown RBP9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Defa17Q64016 82 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Actr3bQ641P0 418 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cd300aQ6SJQ0 318 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Dpy19l3Q71B07 716 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Olfr301Q7TS04 311 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Q8BP99 230 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Cstf2tQ8C7E9 632 aaKnown RBP9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Usp45Q8K387 813 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Plcl2Q8K394 1128 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gid8Q9D7M1 228 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 IgtpQ9DCE9 423 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Pik3cgQ9JHG7 1102 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ninj2Q9JL89 143 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Znhit2Q9QY66 399 aa9.75□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm21083A0A0G2JFD5 256 aa9.74□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Ttll9A2APC3 461 aa9.74□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm3752A6NAT4 150 aa9.74□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Zscan5bB2RTN3 468 aa9.74□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Zar1lC3VD30 291 aa9.74□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Gm6685D3YYP3 228 aa9.74□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Myf6P15375 242 aa9.74□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 Acvr2bP27040 536 aa9.74□□□□□ -0.85
Ccdc40-202ENSMUST00000053440 SykP48025 629 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms