RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Slc13a5Q67BT3 572 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Nudcd1Q6PIP5 582 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tas2r129Q7M709 320 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ppa2Q91VM9 330 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 AassQ99K67 926 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 PirQ9D711 290 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Akap17bA2A3V1 959 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Kbtbd6E9PYD7 486 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Vmn1r238E9Q373 306 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 2210016F16RikG3X8U3 338 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Kbtbd7G5E8C2 690 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tnfsf4P43488 198 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Vbp1P61759 196 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Alg6Q3TAE8 507 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Hephl1Q3V1H3 1159 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 TsnQ62348 228 aaKnown RBP11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Magee1Q6PCZ4 918 aaKnown RBP11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Hus1Q8BQY8 280 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pitrm1Q8K411 1036 aaKnown RBP11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 HnrnplQ8R081 586 aaKnown RBP11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Akr1c20Q8VC77 323 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mark1Q8VHJ5 795 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pcdhb8Q91XZ2 779 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Fam90a1bQ9D4F3 419 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cyp2j8G3UZ38 503 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mup13L7N222 235 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Kif1cO35071 1100 aaKnown RBP11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 AldoaP05064 364 aaKnown RBP11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mmp3P28862 477 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pcsk1P63239 753 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Trmt10cQ3UFY8 414 aaKnown RBP11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 UrgcpQ5NCI0 926 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Fam149b1Q6NSV7 578 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Inppl1Q6P549 1257 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Casp9Q8C3Q9 454 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Celf3Q8CIN6 465 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc30a5Q8R4H9 761 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Unc93b1Q8VCW4 598 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rem2Q8VEL9 341 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Ppil2Q9D787 521 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Armc8Q9DBR3 673 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Il22Q9JJY9 179 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Pkp3Q9QY23 797 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Col18a1P39061 1774 aa11.28□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc6a21A0A1B0GSD2 748 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 1810010D01RikA0A1L1SR87 51 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Itga8A2ARA8 1062 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Supt3B0QZW4 406 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cyp27b1O35084 507 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Slc2a2P14246 523 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 AdprhP54923 362 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Scn2bQ56A07 215 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Abcb7Q61102 752 aaKnown RBP11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Fam83eQ80XS7 481 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Hmgxb4Q80Y32 594 aaKnown RBP11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Krr1Q8BGA5 380 aaKnown RBP11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Tor1aip2Q8BYU6 502 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Batf2Q8R1H8 277 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Rnf8Q8VC56 488 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Fam20bQ8VCS3 409 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Taf12Q8VE65 161 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 CtsqQ91ZF4 343 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Cybrd1Q925G2 290 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Mzt2Q9CQ25 159 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Wdr89Q9D0R9 386 aa11.27□□□□□ -0.6
Topbp1-201ENSMUST00000035164 Sema3aO08665 772 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Igf2bp1O88477 577 aaKnown RBP11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Orm2P07361 207 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gna12P27600 379 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Lrrc8bQ5DU41 803 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 CybbQ61093 570 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cntn2Q61330 1040 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Fscn1Q61553 493 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tlr12Q6QNU9 906 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gpr21Q8BX79 349 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ifi205aQ8CGE8 404 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Syne4Q8CII8 388 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Wdr11Q8K1X1 1223 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Nckap1lQ8K1X4 1134 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Zdhhc12Q8VC90 267 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Adgrf4Q9D2L6 698 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Q9D5Y0 588 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Scamp5Q9JKD3 235 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 AadatQ9WVM8 425 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Nrp2O35375 931 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Nudt2P56380 147 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Psme2P97372 239 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm6377Q8BHV4 303 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ttc34Q8C0Q3 554 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Rab15Q8K386 212 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vmn1r205Q8R276 316 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr801Q8VEU1 318 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Nprl3Q8VIJ8 569 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 WwoxQ91WL8 414 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Prmt7Q922X9 692 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Rgs18Q99PG4 235 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pias4Q9JM05 507 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Clcn5Q9WVD4 746 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cyp2f2P33267 491 aa11.27□□□□□ -0.61
Topbp1-201ENSMUST00000035164 St14P56677 855 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms