RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 NhsB1AV60 1647 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Hes2O54792 157 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gli1P47806 1111 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Cep76Q0VEJ0 659 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 NkrfQ8BY02 690 aaKnown RBP13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gspt1Q8R050 636 aaKnown RBP13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gtf2e2Q9D902 292 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Lrrc69Q9D9Q0 347 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 AgkQ9ESW4 421 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gm595A2AF73 655 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Phb2O35129 299 aaKnown RBP13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Anxa2P07356 339 aaKnown RBP13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Bmp2P21274 394 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Col28a1Q2UY11 1141 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Tgtp2Q3T9E4 415 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Stt3bQ3TDQ1 823 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Spata13Q5DU57 656 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Tgtp1Q62293 415 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Serpina3aQ6P4P1 422 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Mcoln2Q8K595 566 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Evi2bQ8VD58 444 aa13.91□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Zfp105G3X9I0 524 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 MipP51180 263 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gm8773Q3UQ24 132 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Rap1gap2Q5SVL6 712 aaKnown RBP13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Tbx2Q60707 711 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 CerkQ8K4Q7 531 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Fastkd2Q922E6 689 aaKnown RBP13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Cstf1Q99LC2 431 aaKnown RBP13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Lhfpl3Q9CTN8 222 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Commd8Q9CZG3 183 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 1700003F12RikA2AKE5 210 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Il27raO70394 623 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Acat2Q8CAY6 397 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Lrch4Q921G6 680 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Lrrc4Q99PH1 652 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Htatip2Q9Z2G9 242 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gm5145F8VQ88 278 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gm8374L7N2A9 172 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Fgf10O35565 209 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Eif2ak2Q03963 515 aaKnown RBP13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ggnbp1Q6K1E7 370 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Bhlhb9Q6PB60 539 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Olfr699Q7TRN3 316 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Lin52Q8CD94 116 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ugt2b34Q8K154 532 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gprc5cQ8K3J9 440 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Camk1Q91YS8 374 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Zfp810Q99K45 461 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Fam212aQ9CX62 282 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Slc39a1Q9QZ03 324 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Adam18Q9R157 719 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Fndc1E9Q043 1732 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Arhgef10Q8C033 1345 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Vmn2r27D3YUK6 857 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 SagP20443 403 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Rps2P25444 293 aaKnown RBP13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Stat6P52633 837 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Nr2e1Q64104 385 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 HlfQ8BW74 295 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ufsp2Q99K23 461 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Lin37Q9D8N6 246 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Alg5Q9DB25 324 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Bin3Q9JI08 253 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Rpl9-ps1S4R1R7 191 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Rasgef1aA0A0N4SVR5 498 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 SmoktcrA2KF29 484 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Zfp952B0V2W4 504 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Cyp2d34L7N463 504 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Wdr26Q8C6G8 641 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Pcdhga9Q91XX9 932 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Asb7Q91ZU0 318 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Wdr55Q9CX97 388 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 1700031M16RikA0A087WSH0 82 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 OcmP51879 109 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Rps17P63276 135 aaKnown RBP13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 SgcdP82347 289 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Dennd1bQ3U1T9 766 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Uimc1Q5U5Q9 727 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Nipa1Q8BHK1 323 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Usp43Q8BUM9 1132 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 GnalQ8CGK7 381 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 TbceQ8CIV8 524 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Kdelr1Q99JH8 212 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Gimap3Q99MI6 301 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Nudt5Q9JKX6 218 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 AlpiF8VPQ6 554 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ifngr2Q63953 332 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Pip5kl1Q6U7H8 395 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 As3mtQ91WU5 376 aa13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 ClpxQ9JHS4 634 aaKnown RBP13.9□□□□□ -0.18
Col5a1-201ENSMUST00000028280 Ddx60E9PZQ1 1711 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 PtgisO35074 501 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Marcksl1P28667 200 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Cdh9P70407 786 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Armc5Q5EBP3 926 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 FbrsQ8R089 466 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 4931417E11RikQ9CR05 305 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Mospd2Q9CWP6 518 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 HaghlQ9DB32 283 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms