RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 4930550L24RikQ99PA7 320 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Marc1Q9CW42 340 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ttc25Q9D4B2 624 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Actrt2Q9D9L5 377 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Robo2Q7TPD3 1470 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cyp4a29A0A087WPC3 509 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 0610012G03RikA0A0J9YTR2 95 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr391-psA0A0U1RNJ4 312 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Zfp990B1AVN5 605 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Sult3a1O35403 293 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mpzl2O70255 215 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cd4P06332 457 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Alox12P39655 663 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Aldh3a2P47740 484 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pan2Q8BGF7 1200 aaKnown RBP9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dlgap2Q8BJ42 1059 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tmem161bQ8C2L6 487 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 RadxQ8C779 850 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Coq6Q8R1S0 476 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Memo1Q91VH6 297 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dlg2Q91XM9 852 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Rin1Q921Q7 763 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Sntg2Q925E0 539 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Kremen1Q99N43 473 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tlr4Q9QUK6 835 aa9.14□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc28a1E9PXX9 648 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm17555F6U8B9 371 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Calhm3J3QMI4 347 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm3476K7N6V0 257 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ptpn9O35239 593 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mup3P04939 184 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ccr4P51680 360 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Smpdl3aP70158 445 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Smad5P97454 465 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Bcl2a1bQ497M6 172 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 OmpQ64288 163 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ntan1Q64311 310 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slain1Q68FF7 579 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Snx6Q6P8X1 406 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mgat5bQ765H6 792 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Rap2aQ80ZJ1 183 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pcdh20Q8BIZ0 952 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Zfp101Q8BP18 612 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Robo4Q8C310 1012 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 St8sia6Q8K4T1 398 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 RhoqQ8R527 205 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Akr1c13Q8VC28 323 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Znf622Q91VY9 476 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Pcdhb13Q91Y06 796 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Atp6v1c2Q99L60 427 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cby3Q9CVN6 235 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Lrrc57Q9D1G5 239 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 SerhlQ9EPB5 311 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Trim39Q9ESN2 488 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 VapbQ9QY76 243 aaKnown RBP9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 MthfrQ9WU20 654 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm5796E9Q7M8 205 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm3542K7N6U2 270 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm3629K7N6Y2 205 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm10340K7N708 205 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm3696K7N751 203 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm8281L7N235 204 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Marcksl1P28667 200 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Plk2P53351 682 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tead3P70210 439 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tgtp2Q3T9E4 415 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ripk1Q60855 656 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tgtp1Q62293 415 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Inpp4bQ6P1Y8 924 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Txndc15Q6P6J9 344 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr699Q7TRN3 316 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Sult1c1Q80VR3 304 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Fbxo43Q8CDI2 640 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Dennd1cQ8CFK6 786 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 OlahQ8R197 265 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tbc1d21Q9D9D3 336 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tmbim4Q9DA39 238 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Abcb10Q9JI39 715 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 DgkeQ9R1C6 564 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 TfgQ9Z1A1 397 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Cntnap5cQ0V8T7 1305 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm595A2AF73 655 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Gm281D3Z1Y0 860 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Clca3bE9PUL3 1044 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 TpmtO55060 240 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Tcea3P23881 347 aaKnown RBP9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ctps2P70303 586 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ccdc177Q3UHB8 706 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc6a4Q60857 630 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 FaddQ61160 205 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Jak3Q62137 1100 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Rps9Q6ZWN5 194 aaKnown RBP9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Mterf2Q8BKY8 385 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc9a4Q8BUE1 797 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Nudt13Q8JZU0 352 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 CerkQ8K4Q7 531 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Olfr700Q8VFM5 316 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Slc44a4Q91VA1 707 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ubxn6Q99PL6 442 aa9.13□□□□□ -0.95
Ccdc47-201ENSMUST00000002043 Ist1Q9CX00 362 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms