RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SEMA4BQ9NPR2 832 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-227ENST00000640957 SEPT3Q9UH03 358 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 ACKR2O00590 384 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 AP2A1O95782 977 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 RFC2P35250 354 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 BMPR1AP36894 532 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 MAGEA12P43365 314 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 NR2C2P49116 596 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 TRAP1Q12931 704 aaKnown RBP13.72□□□□□ -0.21
SCARB2-227ENST00000640957 SYT16Q17RD7 645 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 SLC16A12Q6ZSM3 486 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 ZNF354CQ86Y25 554 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 APOBEC3FQ8IUX4 373 aaKnown RBP13.72□□□□□ -0.21
SCARB2-227ENST00000640957 CHST13Q8NET6 341 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 OR6P1Q8NGX9 317 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 AFG1LQ8WV93 481 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 C19orf60Q96EN9 201 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 MYRFLQ96LU7 910 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 ACOX2Q99424 681 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 ZBED2Q9BTP6 218 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 GOLGA2P5Q9HBQ8 144 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 TLR9Q9NR96 1032 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 ANAPC2Q9UJX6 822 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 SHROOM3Q8TF72 1996 aa13.72□□□□□ -0.21
SCARB2-227ENST00000640957 TARM1B6A8C7 271 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 I6L893 689 aaPredicted RBP13.71□□□□□ -0.21
SCARB2-227ENST00000640957 FXYD1O00168 92 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 USP2O75604 605 aaPredicted RBP13.71□□□□□ -0.21
SCARB2-227ENST00000640957 MASP1P48740 699 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 AP3M2P53677 418 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 SH3BP2P78314 561 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 FRG1Q14331 258 aaKnown RBP13.71□□□□□ -0.21
SCARB2-227ENST00000640957 SMN1Q16637 294 aaKnown RBP13.71□□□□□ -0.21
SCARB2-227ENST00000640957 PFKFB4Q16877 469 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 NEPROQ6NW34 567 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 NEK10Q6ZWH5 1172 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 AKAP14Q86UN6 197 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 ANKRD13AQ8IZ07 590 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 SCML4Q8N228 414 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 REPS2Q8NFH8 660 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 FIG4Q92562 907 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 ZFYVE19Q96K21 471 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 FAM167AQ96KS9 214 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 NAT9Q9BTE0 207 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 FICDQ9BVA6 458 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 BEX2Q9BXY8 128 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 PRRG3Q9BZD7 231 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 C2orf40Q9H1Z8 148 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 SMOC2Q9H3U7 446 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 AMBNQ9NP70 447 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 PIGVQ9NUD9 493 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 ARMC1Q9NVT9 282 aa13.71□□□□□ -0.21
SCARB2-227ENST00000640957 PTBP2Q9UKA9 531 aaKnown RBP13.71□□□□□ -0.21
SCARB2-227ENST00000640957 IQCA1LA6NCM1 817 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 HS6ST1O60243 411 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 BEST1O76090 585 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 SEC24AO95486 1093 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 FADS2O95864 444 aaKnown RBP13.71□□□□□ -0.22
SCARB2-227ENST00000640957 DNTTP04053 509 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 IGFBP6P24592 240 aaPredicted RBP13.71□□□□□ -0.22
SCARB2-227ENST00000640957 CLK3P49761 638 aaKnown RBP13.71□□□□□ -0.22
SCARB2-227ENST00000640957 MAPRE2Q15555 327 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 SOWAHCQ53LP3 525 aaPredicted RBP13.71□□□□□ -0.22
SCARB2-227ENST00000640957 HGH1Q9BTY7 390 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 ADAMTS10Q9H324 1103 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 TMEM134Q9H6X4 195 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 SETD4Q9NVD3 440 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 PAK1IP1Q9NWT1 392 aaPredicted RBP13.71□□□□□ -0.22
SCARB2-227ENST00000640957 IL37Q9NZH6 218 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.71□□□□□ -0.22
SCARB2-227ENST00000640957 ADAM28Q9UKQ2 775 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 SNX5Q9Y5X3 404 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 PMF1-BGLAPU3KQ54 211 aa13.71□□□□□ -0.22
SCARB2-227ENST00000640957 ZNF638Q14966 1978 aaKnown RBP13.71□□□□□ -0.22
SCARB2-227ENST00000640957 ERI2A8K979 691 aaKnown RBP13.7□□□□□ -0.22
SCARB2-227ENST00000640957 SLCO1B7G3V0H7 640 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 H0YJX3 145 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 MITFO75030 526 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-227ENST00000640957 SEC14L2O76054 403 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 FMO4P31512 558 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 TRPC1P48995 793 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 IL5RAQ01344 420 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 CAMK2BQ13554 666 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 INTS11Q5TA45 600 aaKnown RBP13.7□□□□□ -0.22
SCARB2-227ENST00000640957 CELF2-AS1Q8N7Q2 184 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 SLC35F5Q8WV83 523 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 UBE2FQ969M7 185 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 PABPC5Q96DU9 382 aaKnown RBP13.7□□□□□ -0.22
SCARB2-227ENST00000640957 UHRF1Q96T88 793 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-227ENST00000640957 GPR20Q99678 358 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 VRTNQ9H8Y1 702 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 SNTG2Q9NY99 539 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 DNAJC15Q9Y5T4 150 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 A0A0C4DFX4 3053 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 CCRL2O00421 344 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 AP3D1O14617 1153 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 IPO13O94829 963 aaKnown RBP13.7□□□□□ -0.22
SCARB2-227ENST00000640957 FTH1P02794 183 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 GPX3P22352 226 aa13.7□□□□□ -0.22
SCARB2-227ENST00000640957 TGM1P22735 817 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms