RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 TMEM98Q9Y2Y6 226 aa25.07■■□□□ 1.6
VEGFA-232ENST00000640653 INPP4BO15327 924 aa25.06■■□□□ 1.6
VEGFA-232ENST00000640653 FGF1P05230 155 aa25.06■■□□□ 1.6
VEGFA-232ENST00000640653 PRKD1Q15139 912 aaPredicted RBP25.06■■□□□ 1.6
VEGFA-232ENST00000640653 FOXR1Q6PIV2 292 aa25.06■■□□□ 1.6
VEGFA-232ENST00000640653 SPRED1Q7Z699 444 aa25.06■■□□□ 1.6
VEGFA-232ENST00000640653 RCOR2Q8IZ40 523 aa25.06■■□□□ 1.6
VEGFA-232ENST00000640653 ARL14Q8N4G2 192 aa25.06■■□□□ 1.6
VEGFA-232ENST00000640653 RBM41Q96IZ5 413 aaKnown RBP25.06■■□□□ 1.6
VEGFA-232ENST00000640653 SLC46A1Q96NT5 459 aa25.06■■□□□ 1.6
VEGFA-232ENST00000640653 TRIB3Q96RU7 358 aa25.06■■□□□ 1.6
VEGFA-232ENST00000640653 RBSNQ9H1K0 784 aa25.06■■□□□ 1.6
VEGFA-232ENST00000640653 FAM83DQ9H4H8 585 aa25.06■■□□□ 1.6
VEGFA-232ENST00000640653 GLOD4Q9HC38 313 aa25.06■■□□□ 1.6
VEGFA-232ENST00000640653 FAM208BQ5VWN6 2430 aa25.06■■□□□ 1.6
VEGFA-232ENST00000640653 RP1P56715 2156 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 A0A1W2PNU3 283 aaPredicted RBP25.05■■□□□ 1.6
VEGFA-232ENST00000640653 ZW10O43264 779 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 IPO7O95373 1038 aaKnown RBP25.05■■□□□ 1.6
VEGFA-232ENST00000640653 ASMTLO95671 621 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 MLLT3P42568 568 aaPredicted RBP25.05■■□□□ 1.6
VEGFA-232ENST00000640653 INHBCP55103 352 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 CDK18Q07002 472 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 EIF3IQ13347 325 aaKnown RBP25.05■■□□□ 1.6
VEGFA-232ENST00000640653 BIRC2Q13490 618 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 PCSK7Q16549 785 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 HENMT1Q5T8I9 393 aaKnown RBP25.05■■□□□ 1.6
VEGFA-232ENST00000640653 CCDC70Q6NSX1 233 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 B4GALNT4Q76KP1 1039 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 MARK2Q7KZI7 788 aaKnown RBP25.05■■□□□ 1.6
VEGFA-232ENST00000640653 KDELC2Q7Z4H8 507 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 C17orf82Q86X59 251 aaPredicted RBP25.05■■□□□ 1.6
VEGFA-232ENST00000640653 GALNT13Q8IUC8 556 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 TMTC1Q8IUR5 882 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 CCDC50Q8IVM0 306 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 P3H4Q92791 437 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 TADA1Q96BN2 335 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 CALR3Q96L12 384 aaKnown RBP25.05■■□□□ 1.6
VEGFA-232ENST00000640653 ZFYVE1Q9HBF4 777 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 EPB41L5Q9HCM4 733 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 SAE1Q9UBE0 346 aaPredicted RBP25.05■■□□□ 1.6
VEGFA-232ENST00000640653 TFR2Q9UP52 801 aa25.05■■□□□ 1.6
VEGFA-232ENST00000640653 RHPN2P1A8MT19 583 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 MTSS1O43312 755 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 NDUFA10O95299 355 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 PTPN3P26045 913 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 ACTR1BP42025 376 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 MAZP56270 477 aaKnown RBP25.04■■□□□ 1.6
VEGFA-232ENST00000640653 ACTR1AP61163 376 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 LRP8Q14114 963 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 LLGL1Q15334 1064 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 PYCR3Q53H96 274 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 LYSMD3Q7Z3D4 306 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 B3GNT8Q7Z7M8 397 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 DAAM2Q86T65 1068 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 SPACA3Q8IXA5 215 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 CRELD1Q96HD1 420 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 PRR11Q96HE9 360 aaPredicted RBP25.04■■□□□ 1.6
VEGFA-232ENST00000640653 TEKT5Q96M29 485 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 WDR24Q96S15 920 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 MAGEE1Q9HCI5 957 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 RAD18Q9NS91 495 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 VPS18Q9P253 973 aa25.04■■□□□ 1.6
VEGFA-232ENST00000640653 EPN1Q9Y6I3 576 aaPredicted RBP25.04■■□□□ 1.6
VEGFA-232ENST00000640653 hCG_1818297A0A087WSY0 165 aa25.03■■□□□ 1.6
VEGFA-232ENST00000640653 SOWAHDA6NJG2 315 aa25.03■■□□□ 1.6
VEGFA-232ENST00000640653 ECEL1O95672 775 aa25.03■■□□□ 1.6
VEGFA-232ENST00000640653 PECAM1P16284 738 aaPredicted RBP25.03■■□□□ 1.6
VEGFA-232ENST00000640653 CCKBRP32239 447 aa25.03■■□□□ 1.6
VEGFA-232ENST00000640653 FAM182AQ5T1J6 154 aa25.03■■□□□ 1.6
VEGFA-232ENST00000640653 SPATA22Q8NHS9 363 aa25.03■■□□□ 1.6
VEGFA-232ENST00000640653 NAF1Q96HR8 494 aaKnown RBP25.03■■□□□ 1.6
VEGFA-232ENST00000640653 SRPK1Q96SB4 655 aaKnown RBP25.03■■□□□ 1.6
VEGFA-232ENST00000640653 FOXP3Q9BZS1 431 aa25.03■■□□□ 1.6
VEGFA-232ENST00000640653 ST14Q9Y5Y6 855 aa25.03■■□□□ 1.6
VEGFA-232ENST00000640653 PLD2O14939 933 aa25.02■■□□□ 1.6
VEGFA-232ENST00000640653 MT-CYBP00156 380 aaPredicted RBP25.02■■□□□ 1.6
VEGFA-232ENST00000640653 FECHP22830 423 aa25.02■■□□□ 1.6
VEGFA-232ENST00000640653 TLE3Q04726 772 aa25.02■■□□□ 1.6
VEGFA-232ENST00000640653 BROXQ5VW32 411 aa25.02■■□□□ 1.6
VEGFA-232ENST00000640653 RAB11FIP2Q7L804 512 aa25.02■■□□□ 1.6
VEGFA-232ENST00000640653 FBXO39Q8N4B4 442 aa25.02■■□□□ 1.6
VEGFA-232ENST00000640653 KCNE4Q8WWG9 221 aa25.02■■□□□ 1.6
VEGFA-232ENST00000640653 ATXN7L1Q9ULK2 861 aaPredicted RBP25.02■■□□□ 1.6
VEGFA-232ENST00000640653 CNOT6Q9ULM6 557 aaKnown RBP25.02■■□□□ 1.6
VEGFA-232ENST00000640653 SHOC2Q9UQ13 582 aa25.02■■□□□ 1.6
VEGFA-232ENST00000640653 PLEKHM1Q9Y4G2 1056 aa25.02■■□□□ 1.6
VEGFA-232ENST00000640653 FADS2P1A8MWK0 482 aa25.01■■□□□ 1.59
VEGFA-232ENST00000640653 CDRT15L2A8MXV6 281 aa25.01■■□□□ 1.59
VEGFA-232ENST00000640653 PMPCBO75439 489 aa25.01■■□□□ 1.59
VEGFA-232ENST00000640653 TNFSF15O95150 251 aa25.01■■□□□ 1.59
VEGFA-232ENST00000640653 NDST3O95803 873 aa25.01■■□□□ 1.59
VEGFA-232ENST00000640653 ITGA2BP08514 1039 aa25.01■■□□□ 1.59
VEGFA-232ENST00000640653 PIRTP0C851 137 aa25.01■■□□□ 1.59
VEGFA-232ENST00000640653 TNNT3P45378 269 aaPredicted RBP25.01■■□□□ 1.59
VEGFA-232ENST00000640653 MARCKSL1P49006 195 aa25.01■■□□□ 1.59
VEGFA-232ENST00000640653 B4GALNT1Q00973 533 aa25.01■■□□□ 1.59
VEGFA-232ENST00000640653 ADCY2Q08462 1091 aa25.01■■□□□ 1.59
VEGFA-232ENST00000640653 NR1D2Q14995 579 aa25.01■■□□□ 1.59
VEGFA-232ENST00000640653 PPP2R5EQ16537 467 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms