RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 DMC1Q14565 340 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 LBRQ14739 615 aaKnown RBP8.03□□□□□ -1.12
SCARB2-220ENST00000640076 FUT11Q495W5 492 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 PITRM1Q5JRX3 1037 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 FAXCQ5TGI0 409 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 ZDHHC24Q6UX98 284 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 CCNI2Q6ZMN8 369 aaPredicted RBP8.03□□□□□ -1.12
SCARB2-220ENST00000640076 OVCH1Q7RTY7 1134 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 RAB44Q7Z6P3 723 aaPredicted RBP8.03□□□□□ -1.12
SCARB2-220ENST00000640076 PRR18Q8N4B5 295 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 TEX9Q8N6V9 391 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 EIF1ADQ8N9N8 165 aaKnown RBP8.03□□□□□ -1.12
SCARB2-220ENST00000640076 PCYOX1LQ8NBM8 494 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 NSMCE1Q8WV22 266 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 IFT81Q8WYA0 676 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 LRTOMTQ8WZ04 291 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 ACDQ96AP0 544 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 XPO6Q96QU8 1125 aaKnown RBP8.03□□□□□ -1.12
SCARB2-220ENST00000640076 CHCHD6Q9BRQ6 235 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 MKRN2Q9H000 416 aaKnown RBP8.03□□□□□ -1.12
SCARB2-220ENST00000640076 GBA3Q9H227 469 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 VPS45Q9NRW7 570 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 ZDHHC18Q9NUE0 388 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 DNAJC17Q9NVM6 304 aaKnown RBP8.03□□□□□ -1.12
SCARB2-220ENST00000640076 RBM22Q9NW64 420 aaKnown RBP eCLIP8.03□□□□□ -1.12
SCARB2-220ENST00000640076 UBA2Q9UBT2 640 aaPredicted RBP8.03□□□□□ -1.12
SCARB2-220ENST00000640076 PADI4Q9UM07 663 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 ACTL7AQ9Y615 435 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 MIA3Q5JRA6 1907 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 KIAA1549LQ6ZVL6 1849 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 TRIOO75962 3097 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 TICRRQ7Z2Z1 1910 aa8.03□□□□□ -1.12
SCARB2-220ENST00000640076 CXorf51AA0A1B0GTR3 108 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 DCDC2BA2VCK2 349 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 SYNDIG1LA6NDD5 238 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 CD160O95971 181 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 HLA-DQB2P05538 268 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 ITIH2P19823 946 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 AGXTP21549 392 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 MCM3P25205 808 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 PSMB4P28070 264 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 GJA4P35212 333 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 MAGEA6P43360 314 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 MMP13P45452 471 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 AGFG1P52594 562 aaKnown RBP8.02□□□□□ -1.12
SCARB2-220ENST00000640076 ITGA8P53708 1063 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 ARL4CP56559 192 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 GPR85P60893 370 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 BASP1P80723 227 aaKnown RBP8.02□□□□□ -1.12
SCARB2-220ENST00000640076 TFF2Q03403 129 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 DMTNQ08495 405 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 RFTN1Q14699 578 aaPredicted RBP8.02□□□□□ -1.12
SCARB2-220ENST00000640076 CNN3Q15417 329 aaKnown RBP8.02□□□□□ -1.12
SCARB2-220ENST00000640076 GEN1Q17RS7 908 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 AAK1Q2M2I8 961 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 PARP6Q2NL67 630 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 ITPRIPL2Q3MIP1 535 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 RNASEH2BQ5TBB1 312 aaKnown RBP8.02□□□□□ -1.12
SCARB2-220ENST00000640076 FIGNL1Q6PIW4 674 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 TXNDC11Q6PKC3 985 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 LINGO4Q6UY18 593 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 MILR1Q7Z6M3 343 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 ADIPOR2Q86V24 386 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 MRPL41Q8IXM3 137 aaKnown RBP8.02□□□□□ -1.12
SCARB2-220ENST00000640076 ESX1Q8N693 406 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 BBOF1Q8ND07 529 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 MAFAQ8NHW3 353 aaPredicted RBP8.02□□□□□ -1.12
SCARB2-220ENST00000640076 BAHD1Q8TBE0 780 aaPredicted RBP8.02□□□□□ -1.12
SCARB2-220ENST00000640076 FBXO25Q8TCJ0 367 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 CPT1BQ92523 772 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 ART4Q93070 314 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 CHFRQ96EP1 664 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 TMEM41AQ96HV5 264 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 PSKH2Q96QS6 385 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 NEUROG2Q9H2A3 272 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 BRD9Q9H8M2 597 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 KCNK12Q9HB15 430 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 NT5MQ9NPB1 228 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 IGSF9Q9P2J2 1179 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 RSPH14Q9UHP6 348 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 NFU1Q9UMS0 254 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 SLC27A6Q9Y2P4 619 aa8.02□□□□□ -1.12
SCARB2-220ENST00000640076 CAPN8A6NHC0 703 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 MUSKO15146 869 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 NEBLO76041 1014 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 TMCC1O94876 653 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 APRTP07741 180 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 FDFT1P37268 417 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 SLC6A11P48066 632 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 MAPK10P53779 464 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 PLTPP55058 493 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 TNP2Q05952 138 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 MESP2Q0VG99 397 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 ZNF235Q14590 738 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 KCNJ11Q14654 390 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 MORF4L2Q15014 288 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 PDCD1Q15116 288 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 CYTH1Q15438 398 aa8.02□□□□□ -1.13
SCARB2-220ENST00000640076 HSF5Q4G112 596 aaPredicted RBP8.02□□□□□ -1.13
SCARB2-220ENST00000640076 ANKRD22Q5VYY1 191 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms