RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 BHLHE23Q8NDY6 225 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 THAP3Q8WTV1 239 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 FAM84BQ96KN1 310 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 TMEM246Q9BRR3 403 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 OR51B6Q9H340 312 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ARMC7Q9H6L4 198 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ERAP1Q9NZ08 941 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 SMARCAL1Q9NZC9 954 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 NCKIPSDQ9NZQ3 722 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 COPS3Q9UNS2 423 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 V9GY48 417 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CROCC2H7BZ55 1655 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 MINDY4BA8MYZ0 360 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 STX11O75558 287 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 LTFP02788 710 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 TXNP10599 105 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CDH2P19022 906 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PAFAH1B1P43034 410 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 GABRB2P47870 512 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 GPX6P59796 221 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 GPS1Q13098 491 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 TM4SF20Q53R12 229 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 RESP18Q5W5W9 173 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PHOSPHO2Q8TCD6 241 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 TCP10LQ8TDR4 215 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 FOXJ1Q92949 421 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PTP4A1Q93096 173 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 KLHL32Q96NJ5 620 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 FUCA2Q9BTY2 467 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 LRRC2Q9BYS8 371 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 MFFQ9GZY8 342 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 TDRD3Q9H7E2 651 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 REXO2Q9Y3B8 237 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ZHX2Q9Y6X8 837 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 TMEM82A0PJX8 343 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 METTL21EPA6NDL7 271 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 C2orf71A6NGG8 1288 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 METTL15A6NJ78 407 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 GCATO75600 419 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 DIRAS3O95661 229 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PLA2G4BP0C869 781 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ITGA8P53708 1063 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 MGAT5Q09328 741 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ADIPOQQ15848 244 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CALCRLQ16602 461 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PDSS1Q5T2R2 415 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 DDI2Q5TDH0 399 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 UNC5AQ6ZN44 842 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 LRRTM4Q86VH4 590 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 MON1AQ86VX9 555 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 DNAJC10Q8IXB1 793 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 SLC17A8Q8NDX2 589 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 HTR3CQ8WXA8 447 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 SERPINB11Q96P15 392 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 AP5M1Q9H0R1 490 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 GANQ9H2C0 597 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF556Q9HAH1 456 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 GFOD1Q9NXC2 390 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 AMFRQ9UKV5 643 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 MKLN1Q9UL63 735 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 NCKAP1Q9Y2A7 1128 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PCDHGB6Q9Y5F9 930 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 SPATA31E1Q6ZUB1 1445 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PLB1Q6P1J6 1458 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 GIPC1O14908 333 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF263O14978 683 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 TCAPO15273 167 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PRODHO43272 600 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PSKH1P11801 424 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CCNB1P14635 433 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CCNOP22674 350 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 WNT5AP41221 380 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 NRLP54845 237 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 SNTA1Q13424 505 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 MYO9BQ13459 2157 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 TOR2AQ5JU69 321 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ATXN7L2Q5T6C5 722 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 UGT3A1Q6NUS8 523 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 RPUSD3Q6P087 351 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 INTS5Q6P9B9 1019 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CAVIN3Q969G5 261 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CLPTM1LQ96KA5 538 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 C10orf90Q96M02 699 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PHF12Q96QT6 1004 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 SERPINI1Q99574 410 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CYP3A43Q9HB55 503 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 RGS18Q9NS28 235 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF224Q9NZL3 707 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 ARPP21Q9UBL0 812 aaPredicted RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 PSMD13Q9UNM6 376 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 MTMR6Q9Y217 621 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 CPQQ9Y646 472 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 COPG1Q9Y678 874 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 HEATR1Q9H583 2144 aaKnown RBP4.3□□□□□ -1.72
SCN3A-209ENST00000639244 DNMBPQ6XZF7 1577 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 AP1G1O43747 822 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 GJB1P08034 283 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 POU2F2P09086 479 aa4.3□□□□□ -1.72
SCN3A-209ENST00000639244 XRCC1P18887 633 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms