RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 AP4B1Q9Y6B7 739 aa19.3■□□□□ 0.68
CACNA1A-257ENST00000638009 ADCY10Q96PN6 1610 aa19.3■□□□□ 0.68
CACNA1A-257ENST00000638009 RAB5BP61020 215 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 ATP6V0D1P61421 351 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 TEAD4Q15561 434 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 NUP54Q7Z3B4 507 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 P2RY8Q86VZ1 359 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 SETD6Q8TBK2 473 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 PRMT6Q96LA8 375 aaPredicted RBP19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 SCN1AP35498 2009 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 ZNF268Q14587 947 aaPredicted RBP19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 MXRA8Q9BRK3 442 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 TRPV4Q9HBA0 871 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 PCDHB16Q9NRJ7 776 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 AIREO43918 545 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 CTSHP09668 335 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 PSEN1P49768 467 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 PIGXQ8TBF5 258 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 NPAS2Q99743 824 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 NAA30Q147X3 362 aaPredicted RBP19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 ZDHHC20Q5W0Z9 365 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 SSX6Q7RTT6 188 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 CENPSQ8N2Z9 138 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 CNDP2Q96KP4 475 aaKnown RBP19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 PIGNO95427 931 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 GADD45AP24522 165 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 DLSTP36957 453 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 TPTEP56180 551 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 ZNF311Q5JNZ3 666 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 ACOT1Q86TX2 421 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 IL17REQ8NFR9 667 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 APOC4-APOC2K7ER74 178 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 APOC2P02655 101 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 ANXA3P12429 323 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 HGFP14210 728 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 ST3GAL4Q11206 333 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 CIR1Q86X95 450 aaPredicted RBP19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 TBC1D10CQ8IV04 446 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 ARRDC4Q8NCT1 418 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 ATG4AQ8WYN0 398 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 ZNF700Q9H0M5 742 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 ZNF543Q08ER8 600 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 MAB21L1Q13394 359 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 GPRC5AQ8NFJ5 357 aa19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 C7orf50Q9BRJ6 194 aaKnown RBP19.29■□□□□ 0.68
CACNA1A-257ENST00000638009 AIPO00170 330 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 MPZL3Q6UWV2 235 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 KLHL15Q96M94 604 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 EHD4Q9H223 541 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 KCNF1Q9H3M0 494 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 TBC1D14Q9P2M4 693 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 RAP2CQ9Y3L5 183 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 ARHGEF5Q12774 1597 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 CDK5RAP2Q96SN8 1893 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 PP2D1A8MPX8 630 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 PQLC1Q8N2U9 271 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 CXorf40BQ96DE9 158 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 NDNQ99608 321 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 ADGRE2Q9UHX3 823 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 WASF3Q9UPY6 502 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 LAMP2P13473 410 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 FASTKD3Q14CZ7 662 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 FNDC3BQ53EP0 1204 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 CPNE9Q8IYJ1 553 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 H3BM21 787 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 UBXN7O94888 489 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 PGAM2P15259 253 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 GRIA4P48058 902 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 PHC1P78364 1004 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 PUS10Q3MIT2 529 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 CLP1Q92989 425 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 SLC12A8A0AV02 714 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 LHCGRP22888 699 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 ZNF844Q08AG5 666 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 TDGQ13569 410 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 ADCY4Q8NFM4 1077 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 SMPD3Q9NY59 655 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 CALML5Q9NZT1 146 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 VAPBO95292 243 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 ABHD2P08910 425 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 SEPHS1P49903 392 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 ADIGQ0VDE8 80 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 ASTE1Q2TB18 679 aaPredicted RBP19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 PCSK9Q8NBP7 692 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 TAMM41Q96BW9 452 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 SLC39A3Q9BRY0 314 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 CENPBD1B2RD01 187 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 GSC2O15499 205 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 RPLP0P05388 317 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 CARTPTQ16568 116 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 ZYG11AQ6WRX3 759 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 CFAP206Q8IYR0 622 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 ZFP14Q9HCL3 533 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 LYARQ9NX58 379 aaKnown RBP19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 TRPM6Q9BX84 2022 aa19.28■□□□□ 0.68
CACNA1A-257ENST00000638009 GDI2P50395 445 aaKnown RBP19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 RRP1BQ14684 758 aaKnown RBP19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 LINGO2Q7L985 606 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 SCGB1C1Q8TD33 95 aa19.27■□□□□ 0.68
CACNA1A-257ENST00000638009 HSPA12BQ96MM6 686 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms